Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0772 ATGGAAGGAGGAGGAGCTGCTCCGCCTGCTGACACCGTCATGTCGGACGCAGTGCCGCCGCCACCGCCGCATCCCGACCCACAAAAACATCAGCAACACCAACAACATCTGGTGCCGGAAATGGGGGTGGAGAATATTCCGACAACGTTGAGCCATGGCGGAAGGTTCATTCAGTACAATATATTCGGTAATATATTTGAAGTCACTGCCAAATACAAACCCCCCATCATGCCAATCGGAAAAGGAGCTTATGGTATCGTTTGCTCTGCTCTGAATTACGAGACGAATGAACATGTTGCTATCAAGAAGATTGCTAATGCATTTGACAACAACATTGATGCGAAGAGGACCCTCCGCGAAATCAAGCTGCTTCGCCACATGGATCATGAAAATGTTGTCACAATCAGGGATATAGTGCCACCGCCTCAAAGGGAGGTGTTTAATGATGTTTACATTGCGTATGAGCTAATGGACACTGACCTTCATCAGATCATTCGTTCAAATCAAGCATTATCTGAGGAGCATTGCCAGTATTTTCTGTATCAAGTCCTTCGTGGGTTGAAGTACATACATTCTGCAAATGTTTTGCATAGGGACTTAAAACCTAGCAACCTTCTTTTGAATGCTAATTGTGACCTGAAAATTTGTGATTTTGGACTGGCTCGTGTCACCTCTGAAACTGATTTCATGACTGAATATGTGGTTACAAGATGGTATCGTGCACCAGAGCTTCTGTTAAACTCTTCTGATTACACAACAGCAATTGATGTTTGGTCTGTTGGTTGTATTTTCATGGAGCTGATGGATCGAAAGCCATTGTTTCCTGGCAAAGATCATGTGCATCAGCTGCGTCTACTTATGGAGTTGATTGGCACTCCACCGGAAGCAGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTACCTATTTACCCTCGACAATCTTTCCAAAAAAAGTTTCCGCAACTCCATCCCGCAGCTATAGACCTTGTTGAAAAAATGTTGACTTTTGATCCTAGAAAAAGGATTACTGTTGAAGATGCACTGGCACACCCTTACCTTACATCTCTACATGACATTAGTGATGAACCTGTGTGCATGACTCCCTTCAGCTTCGACTTCGAGCAATATGCTTTGACCGATGAACAAATGAAGGAACTTATATACCATGAAGCCCTAGCATTCAACCCTGATTATCAGCAGTAG 1218 0.4368 MEGGGAAPPADTVMSDAVPPPPPHPDPQKHQQHQQHLVPEMGVENIPTTLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNYETNEHVAIKKIANAFDNNIDAKRTLREIKLLRHMDHENVVTIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQVLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTTAIDVWSVGCIFMELMDRKPLFPGKDHVHQLRLLMELIGTPPEADLGFLNENAKRYIRQLPIYPRQSFQKKFPQLHPAAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQYALTDEQMKELIYHEALAFNPDYQQ* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0772 405 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 32 403 - -
Lan6g0772 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Lan6g0772 405 SUPERFAMILY Protein kinase-like (PK-like) 78 366 IPR011009 -
Lan6g0772 405 Gene3D Phosphorylase Kinase; domain 1 56 395 - -
Lan6g0772 405 Pfam Protein kinase domain 78 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0772 405 SMART serkin_6 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0772 405 MobiDBLite consensus disorder prediction 14 28 - -
Lan6g0772 405 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0772 405 MobiDBLite consensus disorder prediction 1 36 - -
Lan6g0772 405 CDD STKc_TEY_MAPK 66 401 - -
Lan6g0772 405 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 32 403 - -
Lan6g0772 405 Gene3D Transferase(Phosphotransferase) domain 1 157 385 - -
Lan6g0772 405 ProSitePatterns Protein kinases ATP-binding region signature. 79 103 IPR017441 GO:0005524
Lan6g0772 405 ProSitePatterns MAP kinase signature. 108 211 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0772 Lan-Chr6 7111433 7115266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0772 1 405 MAP Kinase Gene Family AT2G43790 83.005 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan6g0772 Pkinase 8.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0772 K14512 - gmx:547616 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0504 12 11726380 11730824 Lan6g0772 6 7111433 7115266 LSH
Lan1g1740 1 31723618 31727935 Lan6g0772 6 7111433 7115266 LSH
Lan6g0772 6 7111433 7115266 Lan18g0522 18 9991402 9995666 LSH