Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0762 ATGAACATGAATATATTATTTCTTGTAGCTGAAAATATGATTAAAAAGCAGAAGGTACAAGTAATTGTTGGCATGCATAAATGGACAGAAGCAACTCAAGTGGCTGAACTAGCTAGCCAAGCTCAAATTCCTATCATATCTTTTGCAGCACCTTCCATTACCCCACAAATGATGGGGATTCGTTGGCCCTATTTGGTGACACTAGCTAACAATGGTACTGCATATGTAAAATGTATTGCAGATATAGTGCGTGCTTATGGGTGGCAGCGAGTAGTAGCCGTTTACGAAGATGATGGTTATGGTGGTGATTATGGAATTCTAGCACTCCTATCTCAGGCCCTCCAGGTTGATGGTTCAATTATCGAGTACCATTTAGCTCTCCCATCATCTTCTTATATGTTTGATTCCGGAAAGTTTATTCGTGAAGAACTGCAGAAGTTAATTGAAAATACACAATCTCGAGTGTTCATTGTTATGCAATCATCATTAGATATGGTGATACATTTGTTCAGAGAAGCTTCACAAATGGGACTTGTGGATAGAGAATCAGTTTGGATAATCCCAGAGAGCATAACTAATTCGCTAGAGTATGTCACTAAAGTTGACATTTCCTATATGGAGGGAGCTTTAGGAATCAAGACATACTACTCTGGAAATAGTGGTGAGTATCAATATTTTGAGGCACAGTTTCGAAGAATTTTCCGAGACAAGTATCCTGAGGAAGATAACCGAAACCCAGGATTTTATGCACTGCAAGCATATGATAGCATTAAAATTACTGCACGAGCATTAGACAGAATGGCCAATGGGAATAGTAGTGGCAAAAATATTTTACTAAGTGAAATATTATCTACCAATTACCTTGGTTTAAGTGGAGAAATTCAATTTGAAGGAATGCAGCTCCTACAGAATCATACCTTAAGGATTGTAAATGTAGATGGGAAGCCTTACAGAGAGTTAGACTTTTGGACTCTGGAACAAGGGTTCACCACTAGTCTCTCTATGGTACAACGTGGAAATGATGCTTCTAGGAACACTGAAAGTTTAAGTGGTTTAGTGATTTGGCCTGGGAAGTTGGAGCTGAGAGTTCCAAAGGGATGGAATATGCCTACTAAACAAAATCCAATGAAAATAGCAGTCCCTGGAAGAACCTCTTTTTCCAAGTTTGTCAAGGTTGAATATGGAGAACATGGATATCCAGTTAAATATACTGGATTCTGCATTGAGATTTTTGAAAAGGTATTAAAATTACTGGAGTATGATCTACCATATGAGTACTATCCCATCAATGGAACCTATCCTGACCTCGTTCAATTTGTCTACAACAAGACTTTTGAGGCTGTAGTTGGTGATATAACGCTACTAGCAGAAAGATTGCAATATGTAGATTTTACTGTTCCATATGCAGAATCAGGATTATCAATGGTAATTACCCAAAAGTCTGAAGATTCAGCATTCATGTTTCTGAAGCCCTTCTCCTGGCAGATGTGGGTGGCAACTGGTGCCATATTGACTTACACAATGTTGGTAGTGTGGTACCTGGAATGTGAACTAAATCCAGATTTCGAGGGTAATTGGAAAAAACAGATGGGGACTGCACTTTCATTTACATTCTTCTCTCTATTCTTTGCACACAGGGAGAAAATCTATAGCAACTTAACTCGTTTGGTGATGGGAGCATGGCTCTTTCTAGTTTTGATTCTTAACTCGAGCTACACAGCCAGTCTTTCTTCGATGCTCACAGTTCAACAACTGAAGCCAAATGTCACAGACATCGATTGGTTGAAGAAGAACAATGCGAAAATTGGTTGTGATGGAGATTCATTTGTTATGACATACCTAGCGAATGTGGAAGGGTTCAAGCCAGAGAAC 1872 0.39 MNMNILFLVAENMIKKQKVQVIVGMHKWTEATQVAELASQAQIPIISFAAPSITPQMMGIRWPYLVTLANNGTAYVKCIADIVRAYGWQRVVAVYEDDGYGGDYGILALLSQALQVDGSIIEYHLALPSSSYMFDSGKFIREELQKLIENTQSRVFIVMQSSLDMVIHLFREASQMGLVDRESVWIIPESITNSLEYVTKVDISYMEGALGIKTYYSGNSGEYQYFEAQFRRIFRDKYPEEDNRNPGFYALQAYDSIKITARALDRMANGNSSGKNILLSEILSTNYLGLSGEIQFEGMQLLQNHTLRIVNVDGKPYRELDFWTLEQGFTTSLSMVQRGNDASRNTESLSGLVIWPGKLELRVPKGWNMPTKQNPMKIAVPGRTSFSKFVKVEYGEHGYPVKYTGFCIEIFEKVLKLLEYDLPYEYYPINGTYPDLVQFVYNKTFEAVVGDITLLAERLQYVDFTVPYAESGLSMVITQKSEDSAFMFLKPFSWQMWVATGAILTYTMLVVWYLECELNPDFEGNWKKQMGTALSFTFFSLFFAHREKIYSNLTRLVMGAWLFLVLILNSSYTASLSSMLTVQQLKPNVTDIDWLKKNNAKIGCDGDSFVMTYLANVEGFKPEN 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0762 624 Pfam Bacterial extracellular solute-binding proteins, family 3 402 481 IPR001638 -
Lan6g0762 624 Gene3D - 485 618 - -
Lan6g0762 624 Pfam Ligand-gated ion channel 493 606 IPR001320 GO:0015276|GO:0016020
Lan6g0762 624 Gene3D - 387 484 - -
Lan6g0762 624 Pfam Receptor family ligand binding region 11 314 IPR001828 -
Lan6g0762 624 Gene3D - 12 304 - -
Lan6g0762 624 SUPERFAMILY Periplasmic binding protein-like II 363 508 - -
Lan6g0762 624 PANTHER GLUTAMATE RECEPTOR 3.4 8 624 - -
Lan6g0762 624 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 8 624 - -
Lan6g0762 624 SUPERFAMILY Periplasmic binding protein-like I 8 367 IPR028082 -
Lan6g0762 624 Gene3D - 71 324 - -
Lan6g0762 624 SMART GluR_14 377 597 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0762 Lan-Chr6 7016354 7019661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0762 10 620 Ion Channels AT2G29120 33.541 8.42e-102 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0762 - - lang:109349571 1224.92