Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0760 ATGGACGGTTACGATGGCACGGTGAGGCTCGGAGCCATTAACTTGAAGCATGATCGCGCCTCCGATTTTGACTCCGCCTCCGACGTGTCGGTTTCGTCGCCGGTTACTCGGCAGAAAGCTGCCGCCGCTAAACAGTTCATAGAGAATCATTACAAAAATTATCTCCAAGGATTGCAAGATCGCAAAGACAGACGTAGAGCGCTTCAAAGGAAAGTGCAAGAAGCGCAAATACCGGTTGAGGAGCAGGAGGAAATGATGAGGAGTTTGGAGCGCCGAGAAACTGAGTACATGAGGTTTCAGAGACGTAAAATTGGAATTGATGACTTTGAGCAATTAACAGTAATTGGTAAAGGTGCTTTTGGTGAGGTGAGGTTATGCCGTGCTAAAAATACCGGAGAGATTTTTGCCATGAAGAAATTGAAGAAGTCAGAGATGCTTAGCCGTGGACAGGTGGAACATGTTCGGTCTGAGAGGAACTTACTGGCAGAGGTTGATAGTAGATGTATAGTAAAACTCCATTACTCATTCCAAGATTCAGATTCCCTATATCTCATCATGGAGTACTTACCTGGTGGTGACATTATGACATTGTTAATGAGGGAAGATATTCTTTCTGAAGATGTTGCTCGCTTCTACATAGCTGAAAGCATTCTTGCTATTCACTCAATACATCAACACAACTATGTGCATAGGGATATAAAACCGGATAACCTGATACTGGATAAAAATGGTCATTTGAAGCTTTCAGACTTTGGCTTATGTAAGCCTCTTGATGATAAATATTCATCGATCTTATTGGAAAGTGAAGATTTAACTAGTCATGAATCAACCAGCGAACCTGAAGGATATTCTGTCTCCCCTTGGTCGATGCCAAAGGAGCAATTACAACAGTGGAAACGTAATCGCCGCGCACTGGCATATTCAACTGTTGGAACTCTTGATTATATGGCACCTGAAGTTTTGCTCAAGAAGGGATATGGAATAGAATGTGATTGGTGGTCTCTTGGGGCAATCATGTACGAGATGCTTATTGGGTATCCTCCCTTTTGTTCTGACGATCCAAGGATGGCCTGCCGTAAGATTGTTAACTGGAAAACATGCTTGAAATTTCCTGAAGAACCCAAGATATCACCTGAAGCAAAGGATCTGATCTGTCACTTACTGTGTGACGTTGACACAAGACTAGGAACTAGGGGAGTAGAAGAAATTAAGGACCATCCTTGGTTCAAGTCTGTTCAGTGGGACATGCTTTATGAATTGGAAGCAGCCTATAAACCTACAGTCATTGGAGACTTGGACACACAAAACTTTGAGAAGTTCCCTGATTTAGATGGCCCACCATGCACAACAACGGCGACTGTAGGACCTTGGCGGAAGATGTTGACATCCAAAGACACCAACTTTATAGGATATACTTATAAGAAGTCAGACATCTTAAAATCACTTGAAAGTTCAGATGCAGATGTCAGACTAAATGGGTCATCAAGCACTCCTTCCTTGATTTCCTTGTTAGGTAGGATTGATTTGCAAGATAATGTCATTCCAGAAAGTGAGCAGAATCTACAAATTTGA 1572 0.4249 MDGYDGTVRLGAINLKHDRASDFDSASDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRALQRKVQEAQIPVEEQEEMMRSLERRETEYMRFQRRKIGIDDFEQLTVIGKGAFGEVRLCRAKNTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDSLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLESEDLTSHESTSEPEGYSVSPWSMPKEQLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLIGYPPFCSDDPRMACRKIVNWKTCLKFPEEPKISPEAKDLICHLLCDVDTRLGTRGVEEIKDHPWFKSVQWDMLYELEAAYKPTVIGDLDTQNFEKFPDLDGPPCTTTATVGPWRKMLTSKDTNFIGYTYKKSDILKSLESSDADVRLNGSSSTPSLISLLGRIDLQDNVIPESEQNLQI* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0760 523 SUPERFAMILY Protein kinase-like (PK-like) 83 453 IPR011009 -
Lan6g0760 523 Coils Coil 72 92 - -
Lan6g0760 523 Gene3D Phosphorylase Kinase; domain 1 79 192 - -
Lan6g0760 523 Pfam Protein kinase domain 109 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0760 523 Gene3D Transferase(Phosphotransferase) domain 1 308 427 - -
Lan6g0760 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Lan6g0760 523 ProSiteProfiles AGC-kinase C-terminal domain profile. 410 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan6g0760 523 SMART pkinase_C_6 410 475 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan6g0760 523 ProSiteProfiles Protein kinase domain profile. 109 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0760 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 509 - -
Lan6g0760 523 SMART serkin_6 109 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0760 523 Pfam Protein kinase C terminal domain 430 473 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lan6g0760 523 Gene3D Phosphorylase Kinase; domain 1 428 438 - -
Lan6g0760 523 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 7 509 - -
Lan6g0760 523 CDD STKc_NDR_like 107 474 - -
Lan6g0760 523 Gene3D Transferase(Phosphotransferase) domain 1 193 260 - -
Lan6g0760 523 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0760 Lan-Chr6 6979891 6987815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0760 1 512 AGC Kinase Gene Family AT5G09890 77.476 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lan6g0760 Pkinase 1.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0760 K08790 - gmx:100814085 964.526