Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0755 ATGGCTCTTCTCCTAGACAACTGTGAAGGTATTTTACTCTCTCTAGACTCTCATAAATCAGTGCCAGCACCTTTCCTTAGCAAAACATACCAACTGGTTAACGACCCTAACACCGATCACATAGTCTCTTGGGGCGAAGATGACACTACCTTTGTTGTTTGGCGTCCTCCTGAGTTCGCTAGAGACCTTCTTCCCAACTATTTCAAGCACAACAATTTCTCTAGCTTCGTTCGTCAACTCAATACTTATGGTTTTAGAAAGATTGTACCGGATAGATGGGAGTTTGCAAACGAATTCTTCAAGAAAGGAGAGAAGCACTTGTTGTGTGAGATCCATAGAAGAAAAACAGCACATCCTCAACAAGTAACAATGAACCATCATCATCTTTCTTCTCCAATGTTCAACAACGTTCCAGGTTTCTTTCCCTTTCATGACCGAGTCAGCATATCTCCACCCACTGACTCGGATGAGTTACCAAGCTGGTGTGACTCGCCGTCCCTCACTTCTCCAACAGCCACAAACATAAGCAACTACAACAGTTCTGTCACTGCACTTTCTGAAGACAACGAAAGACTTAGGAGAAGCAACAACATACTCATGTCAGAACTCGCACACATGAAGAAACTCTACAATGACATAATCTACTTCGTTCAAAACCATGTTAAGCCTGTTGCTCCAAGCAACAACACTTACCCTTCTTTTCCACAACCCTCAGCTCCATCAATGATGCAAAAGCAAATGAATAACCAAGTTCAAGGGTGTTATAATTATTATTCAAGTAACCCTAAGCAAAACTCTCCCACTAATACATCAAGGAGCTCCATTACAATAGTTGAACAACCTGGTGATAATAGCAACTGCAAAACTAAGCTTTTTGGGGTGTCACTTCAATCCAAGAAAAGGGTGCACCCTGAGTATGGATCTAATGATCTTATGGATTACTCTGAAATGAATAACAAGACCCGTGTGGTGTTAACAAAGGATGATGACTTGGGCTTGAATCTCATGCCTCCCAATCCCACTTTTTAG 1029 0.4179 MALLLDNCEGILLSLDSHKSVPAPFLSKTYQLVNDPNTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAHPQQVTMNHHHLSSPMFNNVPGFFPFHDRVSISPPTDSDELPSWCDSPSLTSPTATNISNYNSSVTALSEDNERLRRSNNILMSELAHMKKLYNDIIYFVQNHVKPVAPSNNTYPSFPQPSAPSMMQKQMNNQVQGCYNYYSSNPKQNSPTNTSRSSITIVEQPGDNSNCKTKLFGVSLQSKKRVHPEYGSNDLMDYSEMNNKTRVVLTKDDDLGLNLMPPNPTF* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0755 342 PANTHER BNAC06G00310D PROTEIN 12 336 - -
Lan6g0755 342 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 336 IPR027725 -
Lan6g0755 342 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan6g0755 342 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan6g0755 342 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan6g0755 342 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan6g0755 342 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan6g0755 342 Gene3D - 17 116 IPR036388 -
Lan6g0755 342 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan6g0755 342 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0755 Lan-Chr6 6914669 6916252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0755 1 336 HSF AT1G46264 56.389 5.30e-114 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lan6g0755 HSF_DNA-bind 1.2e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0755 K09419 - gmx:100781389 495.352