Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan6g0754 | ATGCAAGGGCAGAGAAGTACAATTGGTTCCCTGCCTGAAACCTTAGAATTTGATTGTGGATCAACATCTAGTAACGCTACAGTTAATCCGCCAACTTACTGGAGTAATATGCAAAATCCTGCAGAAAACCACATACCTGAATGTATACTTTCCCCTGGTGAGATTAACTCATCCTATGTGAATTATATAAACCAGGACTGGCAAAACTTGAGTGGATGGAGCTTCGGTGAGCCAAGTTCTGGTAACACACAGAATGAGGTTAACAACAATGAGCAGAAAAGAGAACTAGGATGGCCATCTTCAGTAAGTGCTAGTGCTATAGCTGGTCCAGTACTAGAAAGGCGCTCCAGACCAGCCAATGCTCTTTCTTTGGACAATGTCATTACAAGTTCTATGCCTATGAATAGCTCCAGTTCTCATTTGGTGTCCCAGAGTCTTAACTTAAATGCAAGCTTAGCAGATAGTGGCAGTGATAATAGCCATCATGTGGAACATCCTAACTTGCCCAAGTCTAGTGGACCAATGAATGAGCATATTCCACCTATTACTAGTTCGGGTTCTTTTATGCTTCCTCCTGAAAGCAACGGCTTTTTGGTTGAGGATGCTGATGGTAGGCCAGGTTGTTCTCGAGACACTCGCCATGTATCTCGTAAAAGGAAGGCTGTTGAACGAGACTTTGGACAATCTTCATATGTTGGAAGTTGTAGCTACAGTCAGAATAGAGATGGTATTGCTTGGAACACGCTTCCTACTCAGAATTATGCAGGGAGCAATTTTAGCAGATCTGCTTCAGCAGAACAGGTAAACGCAAGACTTGGCCTGAGTACGGGTAACGTTGTATCTGAAAGTGTTCCTGACACAAATGTTGCAGGAAGTTCAGAAAACTTCCTTAGAAATTGTCGTTTGAGGATAAATCCTCCAAGCCAACAAAATTCCATTTCTCCCACTGCATTCTCAAGTAACAGTATGATTAGGAATACTGGTGTTTCTTCGTGCACTTCAATGTTGCAAAGGATTCATCCTGTCGATAATTCTCTGGATTTGAGGTCAGTACCACCAGTTGATACTATGACTCCTCAAAGTCAGCCCCCTATAGTCCATGTTCCTGCTTTACCAAGGAATGCACAATCATTTAGGTGGAGTGGTGGTTCTAGCTTAACAAACAACTACTCATCAAATTCAGTTATGAGTGCAGATAGGGATAATCTACCACATGAGGATGGTAGCTCGAGAAGTATGCCTAGAAACATCTTAGAACAACCAGTGTCTGTCCCTTCAACCAATTTGAGAAATTTGTTCCAGAATCCAGCAATTAGAGCTTCAACTAGTGCAAATTTAAGTATTCCCGGAAATGTTGCTTCATCACGACCAGGGTCAAATTCAGCTATCAATCCATCATCTGCCTCTCCGTGGGTTTCTCCACCCGATCCTCAGCAGCAGTTTCCACGCAGGTTAGCTGAATATGTTCGCTGGCCCTTGTTTTCTCCTGGTTCTGCGGCTGCTGGAAGTCCAATCAACAATTATTCTTCCTTGCACGGTCCTGCTACTTCATCTGTTTTGTCATCTGGGGTGGTACACCCGAGATCATCTACATTGTTGGAGAGGCTAGGTGACAGTGAACATGCAATTCCTCCTTCATTACGATCGTCGGCTGTTGCCGGTGATGGAAGTGGTAGAATTGTATCTGAGCTCCGCAATGTGTTGGGCCTCATGCGTAGGGGTAGGAGCCTGCGACTTGAGGATGTTATGATGCTCAACCATTCAATGTTTCCTGGAATAGCTGATATTCATGACAGGCACAGGGATATGCGACTTGATGTTGATAACATGTCTTATGAGGAGTTATTGGCTTTGGAAGAGCGCATTGGAAATGTAAGTACTGGGTTGAATGAGGAAACCATAATGAAACATTTGAAACAGAAGAAGTATTTAGTTGAAACAGGATCCCAGCATGAGGCAGAACCCTGTTGTGTTTGTCAGGAGGAGTATAAGGATGGAGATAATATGGGATCGCTGGATTGCGGTCATGGTTTCCATTACGACTGTGTAAAACAATGGCTAACACATAAGAATCTCTGCCCCATTTGTAAGACAGCAGGCTTGGCAACATGA | 2112 | 0.4361 | MQGQRSTIGSLPETLEFDCGSTSSNATVNPPTYWSNMQNPAENHIPECILSPGEINSSYVNYINQDWQNLSGWSFGEPSSGNTQNEVNNNEQKRELGWPSSVSASAIAGPVLERRSRPANALSLDNVITSSMPMNSSSSHLVSQSLNLNASLADSGSDNSHHVEHPNLPKSSGPMNEHIPPITSSGSFMLPPESNGFLVEDADGRPGCSRDTRHVSRKRKAVERDFGQSSYVGSCSYSQNRDGIAWNTLPTQNYAGSNFSRSASAEQVNARLGLSTGNVVSESVPDTNVAGSSENFLRNCRLRINPPSQQNSISPTAFSSNSMIRNTGVSSCTSMLQRIHPVDNSLDLRSVPPVDTMTPQSQPPIVHVPALPRNAQSFRWSGGSSLTNNYSSNSVMSADRDNLPHEDGSSRSMPRNILEQPVSVPSTNLRNLFQNPAIRASTSANLSIPGNVASSRPGSNSAINPSSASPWVSPPDPQQQFPRRLAEYVRWPLFSPGSAAAGSPINNYSSLHGPATSSVLSSGVVHPRSSTLLERLGDSEHAIPPSLRSSAVAGDGSGRIVSELRNVLGLMRRGRSLRLEDVMMLNHSMFPGIADIHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLNEETIMKHLKQKKYLVETGSQHEAEPCCVCQEEYKDGDNMGSLDCGHGFHYDCVKQWLTHKNLCPICKTAGLAT* | 704 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan6g0754 | 703 | MobiDBLite | consensus disorder prediction | 204 | 222 | - | - | |
Lan6g0754 | 703 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 620 | 700 | IPR013083 | - | |
Lan6g0754 | 703 | SUPERFAMILY | RING/U-box | 645 | 698 | - | - | |
Lan6g0754 | 703 | MobiDBLite | consensus disorder prediction | 177 | 191 | - | - | |
Lan6g0754 | 703 | MobiDBLite | consensus disorder prediction | 152 | 222 | - | - | |
Lan6g0754 | 703 | MobiDBLite | consensus disorder prediction | 449 | 469 | - | - | |
Lan6g0754 | 703 | CDD | RING-H2_TTC3 | 655 | 697 | - | - | |
Lan6g0754 | 703 | ProSiteProfiles | Zinc finger RING-type profile. | 656 | 697 | IPR001841 | - | |
Lan6g0754 | 703 | MobiDBLite | consensus disorder prediction | 449 | 479 | - | - | |
Lan6g0754 | 703 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 1 | 702 | IPR045191 | GO:0061630 | |
Lan6g0754 | 703 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE MBR2-LIKE ISOFORM X1 | 1 | 702 | - | - | |
Lan6g0754 | 703 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Lan6g0754 | 703 | SMART | ring_2 | 656 | 696 | IPR001841 | - | |
Lan6g0754 | 703 | MobiDBLite | consensus disorder prediction | 389 | 416 | - | - | |
Lan6g0754 | 703 | Pfam | Ring finger domain | 656 | 697 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan6g0754 | Lan-Chr6 | 6880449 | 6887221 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan6g0754 | 303 | 703 | C3H Transcription Factor Family | AT2G15530 | 40.566 | 4.64e-74 | 251 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan6g0754 | - | - | gmx:100783014 | 882.863 |