Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0751 ATGAGTATTCATTATTCAACTAGTCCTCTAGCACTTTTCTCCTTTTATTTACTCATCCCCTTTGTTCTCATTAATGGCTACCAAGCTGAGACCACAAATGCTGATAGCAAAGTTATATCTATTGGTGCAATCATCGATATTAACTCTCGAATTGGAAAAGAACAGCAAGTAGCCATGGACATTGCAGCTCAAAGTTACAATAACACTTCAAACACCTACAAACTGGCTCTCTATTTTCAGGACCTACCCAATGATCCTTTCAAAGCTACTGCTCTTGCTGAAAATATGATTAAAAAGCAGAAGGTACAAGTAATTGTTGGCATGCATAAATGGACAGAAGCAACTCAAGTGGCTGAACTAGCTAGCCAAGCTCAAATTCCTATCATATCTTTTGCAGCACCTTCCATTACCCCACAAATGATGGGGATTCGTTGGCCCTATTTGGTGACACTAGCTAACAATGGTACTGCATATGTAAAATGTATTGCAGATATAGTGCGTGCTTATGGGTGGCAGCGAGTAGTAGCCGTTTACGAAGATGATGGTTATGGTGGTGATTATGGAATTCTGGCACTGCTATCTGAGGCCCTCCAAGTTGATGGTTCAATTATCGAGTACCGTTTAGCTCTCCCATCAACTTCTTATATGTCTGATCCTAGAAAGTTTATTCACGAAGAGCTGCTGAAGTTAATTGAAAATACACAATCTCGGGTGTTCATTGTTATGCAATCATCATTAGATATGGTGATTCATTTGTTTAGAGAAGCTTCACAATTGGGACTTGTAGATAGAGAATCAGCTTGGATAATCCCAGAGAGCGTAACTAATTCGCTAGAGTATGTCACTAAAGTTGACATTTCCTATATGGAGGGAGCTTTAGGAATCCAGACATACTACTCTGGAAATAGTAGTGAGTATCAATATTTTGAGGCTCAGTTCCGAAGAATTTTCCGGGACAAGTATCCTGAGGAAGATAACCGAAACCCAGGATTTTATGCACTGCAAGCATATGATAGCATTAAAGTTACTGCACATGCAGTAGATAGAATGGGCAATAGGGATAATAGTGGCAGAAATAATTTACTAAGTGAAATATTGTCTATCAAATACCTTGGTTTAAGTGGAGAAATTCAATTTGAAGGAATGCAGCTCCTACAGAATCATACCTTAAGGATTGTAAATGTAGATGGGAAGAGTTACAGAGAATTAGACTTTTGGACTCTGGAACAAGGGTTCACCACTAGTCTCTCTATTGAACAAGGTGGCAACAATGCTTCTAGGAACAGTGAAAGTTTAAGTGGTGTAGTAATTTGGCCTGGGAAGTTGGTGCGGAGAGTTCCAAAGGGATGGAATATGCCTACTAAACAAAATCCAATGAAAATAGCAGTTCCCGGAAGAACCTCTTTTTCCAAGTTTGTCAAGGTTGAATATGGAGAACATGGATATCCAGCTAACTATAGTGGATTCTGCATTGAAATTTTTGAAAATGCGTTAAACCTACTGGGGTATAAGCTGCCATTTGAGTACAGTCCCATCAATGGAACCTATGCTGACCTAGTTCAACTTGTCTACAACAAGACTTTTGAGGCTGTAGTTGGTGATATAACGCTACTAGCAGAAAGATTGCAATATGTAGATTTTACTGTGCCATATGCAGAATCAGGATTATCAATGGTAATTACCCAAAAGTATGAAAATTCAGCATTCATGTTTCTGAAGCCCTTCTCCTGGCAGATGTGGGTGGTAACTGCTGCCATATTGACTTACACAATGTTTGTAGTGTGGTACCTGGAGCGGGAACAAAATCCAGAGTTTCATGGCAATTGGAAAAGCCAGATGGGGACTGCACTTTGGTTTACATTCTCCTCTCTATTCTTTGCACACAGGGAGAAAATCTATAGCAACTTAACTCGTTTCGTGATGGGAGCATGGCTCTTTCTAGTTTTGATTCTTAACTCGAGCTACACAGCCAGTCTTTCTTCAATGCTCACAGTTCAACAACTGAAGCCAAATGTCACAGACATCAATTGGTTGAAGAAGAACAATGCGAAAATTGGTTGTGATGGAGATTCATTTGTTATGACATACCTAGCGAATGTGGAAGGGTTCAAGCCAGAGAACATCATAAGCATTAATAGTGAATACATGTATCCCAGTGCATTCAAAAACAACTCAATAGCAGCTGCTTTTCTCGAACTCCCTTACGAAAAAGTATACGTCAATAAATACTGCAAGGGATACTCTGGCTCTGTACCAACCACCAGATTTGGAGGACTGGGATTTATGTTCCAGAAAGGTTCCCCAGTTGCCAAAGACGTTTCTAAAGCTATATTGCAGCTCTTAGAACAGGGAGAGATTAAGAAACTGGAAGATAAATGGTTGAATCCCTCAGGCGAGTGCTCCAACAGCGTGATCTCCACTAATGCAGAAACTTTGAAGCTTGGAAATTTATGGGTTCTATACGTGTTTTCTGGAGGCATTACTACTCTCTGTTTTATACTTCCTACCATCCATTCGCTAAAATATAGTCAAACACCTCAAAATCATGCACAAGGTAATGACACTGCTAATGATGAAAACCCTTGGAAAAGGGCTATCAGATTAGTTAAGAAGATATGTAGCAGAAAGCATGGCGAAGTAAAGGCACGGGGTGATGTTACTGACTGTTCATCCAGGTCAGATTATATTAGCACCACTGGTCCCCCGGAGCATCAGCAGACAACGGCTGCTCAGTTAGTAGAAGTCATAATCAACTCTTCCCCATCACCATTGCAAATAACTAGGAGTTAA 2790 0.4014 MSIHYSTSPLALFSFYLLIPFVLINGYQAETTNADSKVISIGAIIDINSRIGKEQQVAMDIAAQSYNNTSNTYKLALYFQDLPNDPFKATALAENMIKKQKVQVIVGMHKWTEATQVAELASQAQIPIISFAAPSITPQMMGIRWPYLVTLANNGTAYVKCIADIVRAYGWQRVVAVYEDDGYGGDYGILALLSEALQVDGSIIEYRLALPSTSYMSDPRKFIHEELLKLIENTQSRVFIVMQSSLDMVIHLFREASQLGLVDRESAWIIPESVTNSLEYVTKVDISYMEGALGIQTYYSGNSSEYQYFEAQFRRIFRDKYPEEDNRNPGFYALQAYDSIKVTAHAVDRMGNRDNSGRNNLLSEILSIKYLGLSGEIQFEGMQLLQNHTLRIVNVDGKSYRELDFWTLEQGFTTSLSIEQGGNNASRNSESLSGVVIWPGKLVRRVPKGWNMPTKQNPMKIAVPGRTSFSKFVKVEYGEHGYPANYSGFCIEIFENALNLLGYKLPFEYSPINGTYADLVQLVYNKTFEAVVGDITLLAERLQYVDFTVPYAESGLSMVITQKYENSAFMFLKPFSWQMWVVTAAILTYTMFVVWYLEREQNPEFHGNWKSQMGTALWFTFSSLFFAHREKIYSNLTRFVMGAWLFLVLILNSSYTASLSSMLTVQQLKPNVTDINWLKKNNAKIGCDGDSFVMTYLANVEGFKPENIISINSEYMYPSAFKNNSIAAAFLELPYEKVYVNKYCKGYSGSVPTTRFGGLGFMFQKGSPVAKDVSKAILQLLEQGEIKKLEDKWLNPSGECSNSVISTNAETLKLGNLWVLYVFSGGITTLCFILPTIHSLKYSQTPQNHAQGNDTANDENPWKRAIRLVKKICSRKHGEVKARGDVTDCSSRSDYISTTGPPEHQQTTAAQLVEVIINSSPSPLQITRS* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0751 929 Pfam Bacterial extracellular solute-binding proteins, family 3 485 795 IPR001638 -
Lan6g0751 929 Gene3D - 33 154 - -
Lan6g0751 929 SUPERFAMILY Periplasmic binding protein-like I 36 450 IPR028082 -
Lan6g0751 929 Gene3D - 156 326 - -
Lan6g0751 929 Pfam Receptor family ligand binding region 56 397 IPR001828 -
Lan6g0751 929 CDD PBP1_GABAb_receptor_plant 40 416 IPR044440 -
Lan6g0751 929 PANTHER GLUTAMATE RECEPTOR 3.4 20 910 - -
Lan6g0751 929 SUPERFAMILY Periplasmic binding protein-like II 446 795 - -
Lan6g0751 929 SMART GluR_14 460 796 IPR001320 GO:0015276|GO:0016020
Lan6g0751 929 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 20 910 - -
Lan6g0751 929 Gene3D - 568 701 - -
Lan6g0751 929 Gene3D - 453 567 - -
Lan6g0751 929 Pfam Ligand-gated ion channel 796 823 IPR001320 GO:0015276|GO:0016020
Lan6g0751 929 PIRSF IGluLR_plant 8 914 IPR017103 -
Lan6g0751 929 CDD GluR_Plant 457 794 - -
Lan6g0751 929 Gene3D - 742 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0751 Lan-Chr6 6790802 6795304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0751 12 834 Ion Channels AT2G29120 32.122 7.48e-133 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0751 - - aprc:113859865 1242.64