Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0750 ATGAGTATTCATTATTCAACTAGTCCTCTCGCACTTTTCTCCTTTTATTTACTCATCCCCTTTGTTCTCATTAATGGCTACCAAGCTGAGACCACAAATGCTGACAGTAAAGTTATATCTATTGGTGCAATCATCGATATTAACTCTCGTATTGGAAAAGAACAACAAGTAGCCATGGACATTGCAGCTCAAAGATACAATAACACTTCAAACACCTACAAACTGGCTCTCTATTTTCAGGACCTATCCGATGATCCTTTCAAAGCTACTGCTCTTGCTGAAAATATGATTAAAAAGCAGAAGGTACAAGTAATTGTTGGCATGCATAAATGGACAGAAGCAACTCAAGTGGCTGAACTAGCTAGCCAAGCTCAAATTCCTATCATATCTTTTGCAGCACCTTCCATTACCCCACAAATGATGGGGATTCGTTGGCCCTATTTGGTGACACTAGCTAACAATGGTACTGCATATGTAAAATGTATTGCAGATATAGTGCGTGCTTATGGGTGGCAGCGAGTAGTAGCCGTTTACGAAGATGATGGTTATGGTGGTGATTATGGAATTCTGGCACTGCTATCTGAGGCCCTCCAAGTTGATGGTTCAATTATCGAGTACCGTTTAGCTCTCCCATCAACTTCTTATATGTCTGATCCTAGAGAGTTTATTCGCGAAGAGCTGCTGAAGTTAATTGAAAATACACAATCTCGGGTGTTCATTGTTATGCAATCATCATTAGATATGGTGATTCATTTGTTCAGAGAAGCTTCACAAATGGGGCTTGTAGATAGAGAATCAGTTTGGATAATCCCAGAGAGCATAACTAATTCGCTAGAGTATGTCAATAAAGTTGACATTTCATATATGGAGGGAGCTTTAGGAATCAAGACATACTACTCTGGAAATAGTGGTGAGTATCAATATTTTGAGGCACAGTTTCGAAGAATTTTCCGAGACAAGTATCCTGAGGAAGATAACCGAAACCCAGGATTTTATGCACTGCAAGCATATGATAGCATTAAAGTTACTGCACATGCAGTAGATAGAATGGGCAATAGGGATAATAGTGGCAGAAATAATTTACTAAGTGAAATATTGTCTATCAAATACCTTGGTTTAAGTGGAGAAATTCAATTTGAAGGAATGCAGCTCCTACATAATCCTACCTTAACGATTTGGTTGAAGACTTTTGAGGCTGTAGTTGGTGATATAACGCTACTAGCAGAAAGATTGCAATATGTAGATTTTACTGTTCCATATGCAGAATCAGGATTATCAATGGTAATTACCCAAAAGTCTGAAGATTCAGCATTCATGTTTCTGAAGCCCTTCTCCTGGCAGATGTGGGTGGCAACTGGTGCCATATTGACTTACACAATGTTGGTAGTGTGGTACCTGGAATGTGAACTAAATCCAGATTTCGAGGGTAATTGGAAAAAACAGATGGGGACTGCACTTTCATTTACATTCTTCTCTCTATTCTTTGCACACAGGGAGAAAATGTATAGCAGCTTAACTCGTGTAGTGATGGGAGCATGGCTCTTTCTAGTTTTGATTCTTAACTCGAGCTACACAGCCAGTCTTTCTTCAATGCTCACAGTTCAACAACTGAAGCCAAATGTCACAGACATCAATTGGTTGAAGAAGAACAATGCGAAAATTGGTTGTGATGGAGATTCATTTGTTATGACATACCTAGCGAATGTGGAAGGGTTCAAGCCAGAGAACATCATAAGCATTAATAGTGAATACGTGTATCCCAGTGCATTCAAAAACAACTCAATAGCAGCTGCTTTTCTCGAACTCCCTTACGAAAAAGTATACGTCAATAAATACTGCAAGGGATACTCTGGCTCTGTACCAACCACCAGATTTGGAGGACTGGGATTTATGTTCCAGAAAGGTTCCCCAGTTGCCAAAGACGTTTCTAAAGCTATATTGCAGCTCTTAGAACAGGGAGAGATTAAGAAACTGGAAGATAAATGGTTGAATCCCTCAGGCGAGTGCTCCAACAGCGTGATCTCCACTAATGCAGAAACTTTGAAGCTTGGAAATTTATGGGTTCTATACGTGTTTTCTGGAGGCATTACTACTCTCTGTTTTATACTTCCTACCATCTATTCGCTAAAATATAGTCAAACACCTCAAAATCATGCACAAGGTAATGACACTGCTAATGATGAAAACCCTTGGAAAAGGGCTATCAGATTAGTTAAGAAGATATGTAGCAGAAAGCATGGCGAAGTAAAGGCACGGGGTGATGTTACTGACTGTTCATCCAGGTCAGATTATATTAGCACCACTGGTCCCCCGGAGCATCAGCAGACAACGGCTGCTCAGTTAGTAGAAGTCATAATCAACTCTTCCCCATCACCATTGCAAATAACTAGGAGTTAA 2397 0.3988 MSIHYSTSPLALFSFYLLIPFVLINGYQAETTNADSKVISIGAIIDINSRIGKEQQVAMDIAAQRYNNTSNTYKLALYFQDLSDDPFKATALAENMIKKQKVQVIVGMHKWTEATQVAELASQAQIPIISFAAPSITPQMMGIRWPYLVTLANNGTAYVKCIADIVRAYGWQRVVAVYEDDGYGGDYGILALLSEALQVDGSIIEYRLALPSTSYMSDPREFIREELLKLIENTQSRVFIVMQSSLDMVIHLFREASQMGLVDRESVWIIPESITNSLEYVNKVDISYMEGALGIKTYYSGNSGEYQYFEAQFRRIFRDKYPEEDNRNPGFYALQAYDSIKVTAHAVDRMGNRDNSGRNNLLSEILSIKYLGLSGEIQFEGMQLLHNPTLTIWLKTFEAVVGDITLLAERLQYVDFTVPYAESGLSMVITQKSEDSAFMFLKPFSWQMWVATGAILTYTMLVVWYLECELNPDFEGNWKKQMGTALSFTFFSLFFAHREKMYSSLTRVVMGAWLFLVLILNSSYTASLSSMLTVQQLKPNVTDINWLKKNNAKIGCDGDSFVMTYLANVEGFKPENIISINSEYVYPSAFKNNSIAAAFLELPYEKVYVNKYCKGYSGSVPTTRFGGLGFMFQKGSPVAKDVSKAILQLLEQGEIKKLEDKWLNPSGECSNSVISTNAETLKLGNLWVLYVFSGGITTLCFILPTIYSLKYSQTPQNHAQGNDTANDENPWKRAIRLVKKICSRKHGEVKARGDVTDCSSRSDYISTTGPPEHQQTTAAQLVEVIINSSPSPLQITRS* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0750 798 Gene3D - 156 325 - -
Lan6g0750 798 PANTHER GLUTAMATE RECEPTOR 3.4 395 779 - -
Lan6g0750 798 PANTHER GLUTAMATE RECEPTOR 3.4 20 386 - -
Lan6g0750 798 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 20 386 - -
Lan6g0750 798 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 395 779 - -
Lan6g0750 798 Pfam Ligand-gated ion channel 665 692 IPR001320 GO:0015276|GO:0016020
Lan6g0750 798 SUPERFAMILY Periplasmic binding protein-like I 36 393 IPR028082 -
Lan6g0750 798 CDD PBP1_GABAb_receptor_plant 40 392 IPR044440 -
Lan6g0750 798 Pfam Bacterial extracellular solute-binding proteins, family 3 396 664 IPR001638 -
Lan6g0750 798 Pfam Receptor family ligand binding region 56 393 IPR001828 -
Lan6g0750 798 Gene3D - 437 571 - -
Lan6g0750 798 Gene3D - 333 436 - -
Lan6g0750 798 SUPERFAMILY Periplasmic binding protein-like II 395 664 - -
Lan6g0750 798 SMART GluR_14 339 665 IPR001320 GO:0015276|GO:0016020
Lan6g0750 798 Gene3D - 33 154 - -
Lan6g0750 798 Gene3D - 611 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0750 Lan-Chr6 6783845 6787434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0750 337 784 Ion Channels AT2G29100 32.009 1.88e-59 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0750 - - lang:109350412 1568.9