Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0749 ATGAGTATTCATTATTCAACTAGTCCTCTAGCACTTTTCTCCTTTTATTTACTCATCCCCTTTGTTCTCATTAATGGCTACCAAGCTGAGACCACAAATGCTGACAGTAAAGTTATATCTATTGGTGCAATCATCGATATTAACTCTCGTATTGGAAAAGAACAACAAGTAGCCATGGACATTGCAGCTCAAAGATACAATAACACTTCAAACACCTACAAACTGGCTCTCTATTTTCAGGACCTATCCGATGATCCTTTCAAAGCTACTGCTCTTGCTGAAAATATGATTAAAAAGCAGAAGGTACAAGTAATTGTTGGCATGCATAAATGGACAGAAGCAACTCAAGTGGCTGAACTAGCTAGCCAAGCTCAAATTCCTATCATATCTTTTGCAGCACCTTCCATTACCCCACAAATGATGGGGATTCGTTGGCCCTATTTGGTGACACTAGCTAACAATGGTACTGCATATGTAAAATGTATTGCAGATATAGTGCGTGCTTATGGGTGGCAGCGAGTAGTAGCCGTTTACGAAGATGATGGTTATGGTGGTGATTATGGAATTTTGGCACTGCTATCTGAGGCCCTCCAAGTTGATGGTTCAATTATCGAGTACCGTTTAGCTCTCCCATCAACTTCTTATATGTCTGATCCTAGAAAGTTTATTCACGAAGAGCTGCTGAAGTTAATTGAAAATACACAATCTCGGGTGTTCATTGTTATGCAATCATCATTAGATATGGTGATTCATTTGTTCAGAGAAGCTTCACAAATGGGGCTTGTAGATAGAGAATCAGTTTGGATAATCCCAGAGAGCATAACTAATTCGCTAGAGTATGTCAATAAAGTTGACATTTCATATATGGAGGGAGCTTTAGGAATCAAGACATACTACTCTGAAAATAGCAATGAGTATCAATATTTTGAGGCTCAGTTCCGAAGAACTTTCCGAGACAAATATCCTGAGGAAGATAACCGAAACCCAGGATTTTATGCACTGCAAGCATATGATAGCATTAAAATTACTGCACAAGCAGTAGATAGAATGGGCAATAGGGATAGTAGTGGCAGAAATATTTTACTAAGTGAAATATTGTCTACCAAATACCTTGGTTTAAGTGGAGAAATTCAATTTGAAGGAATGCAGCTCCTACATAATCCTACCTTAACGATTGTAAATGTAGATGGAAAGAGTTACAGAGAATTAGACTTTTGGACTCTGGAACAAGGGTTCACCACTAGTCTCTCTATGGAACAAGGTGGTGATGATGCTTCTAGGAACACTGAAAGTTTAAGTGGTTTAGTGATTTGGCCTGGGAAGTTGGTGCTGAGAGTTCCAAAGGGATGGAATCTGCCTACTAAACAAAATCCAATGAAAATAGCAGTTCCTGGAAGAACCTCTTTTTCCAAGTTTGTCAAGGTTGAATATGGAGAGCATGGAAGTCAAGTTAAATATACTGGATTCTGCATTGAGATTTTTGAAAAGGTGTTAAAACTTTTGGAGTATGATCTGCCATATGAGTACTATCCCATCAATGGAACCTATCCTGACCTGGTTCAGCTCGTCTATAACAAGACTTTTGAGGCTGTAGTTGGAGATATGACGCTACTATCAGACAGATTGCAATATGTAGATTTTACTGTGCCATATGCAGAATCAGGATTATCAATGATAGTGCCCCAAAAGTCTGAAGATTCAGCATTGATGTTTCTGAAGCCCTTCACCTGGCAGATGTGGGTGGTAACTGGTGCCATATTGACTTACACAATGTTGGTAGTTTGGTACCTGGAGCGGGGGAAAAATCCAGAGTTCCAGGGTAATTGGAAAAGCCAGATGGGGACTGCACTTTCATTTACATTCTTCTCTCTATTCTTTGCACACAGGGAGAAAATGTATAGCAGCTTAACTCGTGTAGTGATGGGAGCATGGCTCTTTCTAGTTTTGATTCTTAACTCCAGCTACACTGCCAGTCTTTCTTCAATGCTCACAGTTCAACAACTGAAGCCAAATGTCACAGACATTGAGTGGTTGAAGAAGAACAACGAGAAAATTGGTTGTGATGGAGATTCATTTGTTAGGGCATACCTAGTGAATGTGGAAAGGTTCAAGCCAGAGGACATCATAAACATTAGTAGTGAATACAATTACCACGGTGCATTTAAAAACCACTTAATAGCAGCTGCTTTTCTCGAACTACCTTATGAAAAAGTATACGCCAGTAAATACTGCACAGGATACTCTGGCTCTGTTCCATCCACCAGATTTGGAGGATTGGGATTTATGTTCCAGAAAGGCTCCCCAGTTGCCAAAGACGTTTCTAAAGCTATATTGCAGCTCTTAGAACGGGGAGAACTTCAGAAATTGGAAGAGAAATGGTTGAATCCCTCAGGCGAGTGCACCAACACTGTGATCTCCACCAACGCAGAAACTTTGAAGCTTGGAAATTTATGGGTTCTATATGTAATTTCTGGAGGCACTTCTACTATCTGTTTTATACTTTCTACCATCTATTCGCTAAAATATAGTCAAACACCTCAAAATTATGAACAAGGTAATGACACCCCTAATCATGAAAACCCTTGGAAAAGGGCTGTCAAATTAGTTAAGAAGATATTTAGCAGAAAGCATGGCGAAGTAAAGACACAGGATGATGTTACTGACTGTTCTTCATGGTGGGATTATATCAGCACCACTGATACCCCGGAGCATCAGCAGACAACGGCTTCTAAGTTACCAGAAATCATAATCCACTCTTCCCCATCACCATTGCAAATAACTCCTGGTCATAGTTCATGA 2799 0.3984 MSIHYSTSPLALFSFYLLIPFVLINGYQAETTNADSKVISIGAIIDINSRIGKEQQVAMDIAAQRYNNTSNTYKLALYFQDLSDDPFKATALAENMIKKQKVQVIVGMHKWTEATQVAELASQAQIPIISFAAPSITPQMMGIRWPYLVTLANNGTAYVKCIADIVRAYGWQRVVAVYEDDGYGGDYGILALLSEALQVDGSIIEYRLALPSTSYMSDPRKFIHEELLKLIENTQSRVFIVMQSSLDMVIHLFREASQMGLVDRESVWIIPESITNSLEYVNKVDISYMEGALGIKTYYSENSNEYQYFEAQFRRTFRDKYPEEDNRNPGFYALQAYDSIKITAQAVDRMGNRDSSGRNILLSEILSTKYLGLSGEIQFEGMQLLHNPTLTIVNVDGKSYRELDFWTLEQGFTTSLSMEQGGDDASRNTESLSGLVIWPGKLVLRVPKGWNLPTKQNPMKIAVPGRTSFSKFVKVEYGEHGSQVKYTGFCIEIFEKVLKLLEYDLPYEYYPINGTYPDLVQLVYNKTFEAVVGDMTLLSDRLQYVDFTVPYAESGLSMIVPQKSEDSALMFLKPFTWQMWVVTGAILTYTMLVVWYLERGKNPEFQGNWKSQMGTALSFTFFSLFFAHREKMYSSLTRVVMGAWLFLVLILNSSYTASLSSMLTVQQLKPNVTDIEWLKKNNEKIGCDGDSFVRAYLVNVERFKPEDIINISSEYNYHGAFKNHLIAAAFLELPYEKVYASKYCTGYSGSVPSTRFGGLGFMFQKGSPVAKDVSKAILQLLERGELQKLEEKWLNPSGECTNTVISTNAETLKLGNLWVLYVISGGTSTICFILSTIYSLKYSQTPQNYEQGNDTPNHENPWKRAVKLVKKIFSRKHGEVKTQDDVTDCSSWWDYISTTDTPEHQQTTASKLPEIIIHSSPSPLQITPGHSS* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0749 932 Gene3D - 747 802 - -
Lan6g0749 932 Gene3D - 466 567 - -
Lan6g0749 932 Gene3D - 568 697 - -
Lan6g0749 932 Pfam Ligand-gated ion channel 796 826 IPR001320 GO:0015276|GO:0016020
Lan6g0749 932 CDD PBP1_GABAb_receptor_plant 40 416 IPR044440 -
Lan6g0749 932 SUPERFAMILY Periplasmic binding protein-like II 444 795 - -
Lan6g0749 932 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 20 911 - -
Lan6g0749 932 SMART GluR_14 460 796 IPR001320 GO:0015276|GO:0016020
Lan6g0749 932 Pfam Receptor family ligand binding region 56 397 IPR001828 -
Lan6g0749 932 Gene3D - 33 154 - -
Lan6g0749 932 Gene3D - 156 327 - -
Lan6g0749 932 PIRSF IGluLR_plant 8 920 IPR017103 -
Lan6g0749 932 Pfam Bacterial extracellular solute-binding proteins, family 3 484 795 IPR001638 -
Lan6g0749 932 CDD GluR_Plant 457 794 - -
Lan6g0749 932 PANTHER GLUTAMATE RECEPTOR 3.4 20 911 - -
Lan6g0749 932 SUPERFAMILY Periplasmic binding protein-like I 36 450 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0749 Lan-Chr6 6776019 6780718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0749 12 843 Ion Channels AT2G29120 31.797 1.50e-130 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0749 - - aprc:113859865 1265.75