Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0742 ATGGCTTTCAGTAGCAGTAATGGAAGTGAAGAGAGTGAGATGTATCATGCACAAATCCACTTGTATAAGCATGTATACAACTTCGTAAGCGCCATGGCTCTCAAATCTGTTATGGAACTAGGCATAGCAGATATAATCCATAACAATGGAAAACCCATCACTCTTTCTGAGTTAGCCTCATCCTTGAAACTCCACCCTTCAAAAATTAGCGTCCTTCATAGGTTCTTGCGCCTCTTAACACACAATGGATTCTTTGCCAAAACAAAAGTACAAGAAGAAGAAGCATATGTTTTGACCCCTCCATCAAAGCTTCTTATAACAACCAAGCCAACATGTTTGGCACCTATAGTTAAGGGAGCCCTTCATTCAAGTTCCTTAGACATGTGGCACTCTTCTAAGAAATGGTTCACTGAGGATAAGGGACTCACACTTTATGAGACTGCAACTAATGAGAGTTTTTGGGCCTTCCTTAATGGAAATCATGATTCTTTGATCATGTTTCAAGAGGCTATGGCAGCTGATTCTCATATGTTCAAGCTTGCTCTCAAAGAGTGCAAGCATGTGTTTGAGAATTTGGAATCACTAGTTGATGTGGGAGGAGGGATCGGTGGTGTAACAAAGCTCATCAATGAAGCATTTCCTCACATGAAATGCATAGTATTTGATCAACCACAGGTTGTGGCTAATTGCTCAGGAAATGAAAATTTGAGTTTTGTTGGTGGAGATATGTTCAAATCCATTCCTTCTGCTGATGCAGTTTTACTCAAGTGGGTTCTACATGATTGGAATGATGAATTATCTTTGAAGATATTGAAGAACTGCAAAGAAGCTATTTCACACAAAGGAAAAAAAGGAAAAGTGATTATCATCGACATAGCTATAGATGAAGAGAGTGATGATCCTGAATTAACAGAGTTGAAGCTGGATTATGACTTGGTGATGCTAACTATGTTCAATGGAAAAGAAAGGGGAAAGAAAGAATGGGAGAATCTTATCTATGAAGCAGGTTTCAGCAACTACAAGATCACCCCAATATGTGGCTTCAAGTCTCTCATTGAAGTTTATCCCTAG 1071 0.3912 MAFSSSNGSEESEMYHAQIHLYKHVYNFVSAMALKSVMELGIADIIHNNGKPITLSELASSLKLHPSKISVLHRFLRLLTHNGFFAKTKVQEEEAYVLTPPSKLLITTKPTCLAPIVKGALHSSSLDMWHSSKKWFTEDKGLTLYETATNESFWAFLNGNHDSLIMFQEAMAADSHMFKLALKECKHVFENLESLVDVGGGIGGVTKLINEAFPHMKCIVFDQPQVVANCSGNENLSFVGGDMFKSIPSADAVLLKWVLHDWNDELSLKILKNCKEAISHKGKKGKVIIIDIAIDEESDDPELTELKLDYDLVMLTMFNGKERGKKEWENLIYEAGFSNYKITPICGFKSLIEVYP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0742 356 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Lan6g0742 356 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
Lan6g0742 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 356 IPR016461 GO:0008168
Lan6g0742 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Lan6g0742 356 Gene3D - 3 105 IPR036388 -
Lan6g0742 356 PANTHER O-METHYLTRANSFERASE 6 356 IPR016461 GO:0008168
Lan6g0742 356 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 6 356 - -
Lan6g0742 356 Gene3D Vaccinia Virus protein VP39 107 356 IPR029063 -
Lan6g0742 356 Pfam O-methyltransferase domain 129 338 IPR001077 GO:0008171
Lan6g0742 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 355 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0742 Lan-Chr6 6723340 6728719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0742 29 343 Monolignol Biosynthesis Gene Families AT5G54160 33.232 8.77e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0742 K22588 K13259 gmx:100807589 560.066