Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0740 ATGATCACAAATTATAAAATGGACCATGCCCAGTATATTATTGCTTATTATTTGGTCATGGTTACTCTATCCACCTCTCTCATGGTTCTTTGTGTTGTCCTCTTTCTTATTTGCAAAAAGAAACCAATTGATTCTGTAGAAACACTTCCTGTGAAGCTTTGTGCTCAAGCTTACTCGCTGATAGACATTGATGCTGCTACTGATGGCTTCAATAATAGAAGAATTGTTGGTAAGGGTAGGTTAGGAACTGTTTATGTTGGGGTGCTAGAAAAAGGAGAAAAAATTGTAGCTTTGAAGAGGATTCATCAATTGCTTGTGTTGAAAAATGCAGGATTTGGTTTCTCATCTGTGTTGAAATGCCTCTCTTCAGTTCAACACCCTAACATAGTTCCTATAATAGGATTCTCAGAAGCACCAGGTGAGAGAATCATAGTGATGGAGCTTGTGAGAATGGTAAGCTTGGACTTCTATTTGCACCAAAATGTAAATGGTGCTTCACTTCTGGATTGGAACAAGAGGATTAGAATTGTAGCTGGAGCATGTAAAGGGCTTCAGTATCTGCATGAAATGGTAGCACCAAGTATTGTACATGGTTGTGTTAAGTCTTCAAATATTTTAATTGATGTCAACTTCTGTGCTAGGATTTCTGATTATGGTCTCAACTTCTTGGCACCCTTTGAAAAGAGAGGTCTAGAAGGTTATGTAGATTATGAATATTGGAATGGAAGTGGTGCTAGCAAGGAAAGTGATGTTTATGGGTTAGGGGTAGTTATTCTAGAGATTTTAAGTGGTAGAGGATGTGAAGAAGGATTGCTAGAAAAGTGGGCATTGCCTTTGATCAAAGAAATGTGTTTTAGTGAACTTTTGGATCCAAGATTGGTAATTCCTTCAAATATGAAGCCTCTTGTTAGATTAGCCAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGGAAGTGTAGGCCTTCCATGGCTCAAGTAGCTACTATTTTGAACAATTTAGAGATGGAAATGTGTATGTGA 1020 0.3775 MITNYKMDHAQYIIAYYLVMVTLSTSLMVLCVVLFLICKKKPIDSVETLPVKLCAQAYSLIDIDAATDGFNNRRIVGKGRLGTVYVGVLEKGEKIVALKRIHQLLVLKNAGFGFSSVLKCLSSVQHPNIVPIIGFSEAPGERIIVMELVRMVSLDFYLHQNVNGASLLDWNKRIRIVAGACKGLQYLHEMVAPSIVHGCVKSSNILIDVNFCARISDYGLNFLAPFEKRGLEGYVDYEYWNGSGASKESDVYGLGVVILEILSGRGCEEGLLEKWALPLIKEMCFSELLDPRLVIPSNMKPLVRLAKVASACVGNSRKCRPSMAQVATILNNLEMEMCM* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0740 339 Gene3D Transferase(Phosphotransferase) domain 1 151 338 - -
Lan6g0740 339 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 13 338 - -
Lan6g0740 339 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 13 338 - -
Lan6g0740 339 Pfam Protein kinase domain 71 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0740 339 ProSiteProfiles Protein kinase domain profile. 70 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0740 339 Gene3D Phosphorylase Kinase; domain 1 37 148 - -
Lan6g0740 339 SUPERFAMILY Protein kinase-like (PK-like) 45 330 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0740 Lan-Chr6 6717108 6718335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0740 55 331 Receptor kinase-like Gene Family AT3G59420 38.832 2.32e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lan6g0740 Pkinase 5.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0740 - - vun:114187437 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0740 6 6717108 6718335 Lan19g0911 19 16511647 16512762 PCT
Lan19g0911 19 16511647 16512762 Lan6g0740 6 6717108 6718335 PCT