Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0738 ATGCTTCCAATGTTTCTTCTCATCCTCTTTTCCATTCTCTCATCACCTCTCACCATTCTATCATTAAACCAAGAAGCCCTTTACCTCTACCAATTCAAACTCCTCCTTGACGACCCTAACTCCCACCTTTCCTCCTGGAACCCCCTCGACCCCACCCCATGCAACTGGTACGGCGTCACCTGCTCCACCACCACAACCACCGTCACCACCATCGACCTCTCAAACACAAACATAGAAGGCCCATTCCCCACCACCATTCTCTGCCGCCTCCCTAACCTCTCCTCCATCACCCTCTTCAACAACTCCATCGACCAAACCCTCTCCCCCGACATCTCCCTCTGCCGAAACCTCATCCACCTCGACCTCTCCCAGAACCTATTAACTGGTCCACTCCCCGCCACCCTCCCCCAACTCCCCAACCTTAAGTACCTCGACCTCTCCGGCAACAACTTCTCCGGCAGCATCCCCGAATCCTTCGGAACCTTCCAGAAACTTGAAGTCATTTCCTTAGTTTATAATCTTATACAAGGTACAATCCCTCCTTCACTCGGTAACATCACCACTCTTAAAATGCTCAACCTTTCTTACAACCCGTTTTTTCCGGGTCGGATCCCACCAGAATTCGGTAACCTAACCAATCTTCAGGTACTTTGGTTAACCCATTGCAACCTCGTTGGACTCATCCCTGACTCACTTGGGGAGTTAAAAAAGCTCGAAGATTTGGACCTCGCGTTGAATGATCTATACGGTTCTATTCCGAGTTCGCTCACTGAGTTAACCAGCTTGAAACAGCTTGAGTTGTATAATAACTCCCTCTCCGGTGAGTTGCCACGTAGCATGGGGAACCTTACTTCTTTGAGGCTTTTCGACGCGTCAATGAACCACTTGACGGGGAAAATTCCCGATGAGTTATGTTCATTACCGCTCGAGAGTCTCAATTTGTACGAGAATCGCTTCCATGGCGAGTTGCCGGCGAGTATCGCAAACTCGCCGAACCTATATGAACTTAGGTTGTTCGGGAACAGGCTTACCGGGAAGTTGCCGGAGAATTTAGGAAAGCATTCACCTTTGAGATGGCTTGATGTTTCGAGCAACCAGTTCTATGGCTCTATTCCGGCGACTCTATGTGATTTCGGAGTTCTGGAGGAGCTTCTGGTGATATATAATCTTTTCTCTGGTAAGATTCCGGCGAGTTTGGGCACGTGCCAGAGTTTGACGCGTGTCAGACTTGGTTTTAACAGATTTTCCGGCGAGGTTCCGGCGGGGATTTGGGGTCTTCCACATGTCTATCTTCTTGAACTTGCTGACAACTCATTTTCCGGTTCCATCTCGAAAACCATTGCTGGTGCAACAAACTTGTCTTTGTTGTTCTTGTCGAATAACAACTTCACTGGACCTATTCCTAATGAGATAGGATGGTTGGAGGGTCTTGTGGAACTTTCTGGAAGCAATAACATGTTCAGTGGTTCTCTTCCTGATAGTGTTGTGAATCTTGGCCAGCTTGGGACCCTTGATCTTCACAATAATAAGCTCTCTGGGGAGCTTCCTAAAGGGATTCATTCATGGAAGAAACTCAATGAGTTGAATTTGGCTAACAATGAGATTGGTGGGAAGATTCCTGATGGTATTGGAAGTTTGACTGTTCTTAATTTCCTTGACCTTTCCAATAACAAAATTTCAGGGAATGTCCCTCGTGGGTTGCAGAATTTGAAGCTCAATCAGCTTAATTTGTCTTATAACCATTTATCTGGAGAACTTCCACCCCTCTTGGCTAAAGATATGTACAGGACTAGTTTTCTGGGCAATCCAGGTTTGTGTAGGGATTTGAGAGGTTTATGTGATGGTAGGAGTGATGAAAAGAGTGCAGGTTATATTTGGTTGCTTAGGACTATTTTTGTTGCTGCTACTTTGGTGTTATTTGTTGGTGTGGTCTGGTTCTATTTCAAGTATAAAAGTTTGAAGTATGCAAGGGCTATTGATAAATCAAGATGGACGTTGATGTCGTTTCATAAACTGGGTTTTGGTGATGATGAGATTTTTAATTTCCTTGATGAAGATAATATGATAGGAAGTGGGGCTTCTGGGAAGGTGTTCAAGGTTGTTCTTGGTAATGGAGAAACTGTTGCAGTGAAGAAGATATGGGGCAGGGCCAAGAAGGAAGTAGAAAGTGGAGATCTTGAAAATAGGGGTAGGGTTGAAGACACTACTTTTGACGCAGAGGTTGATACTTTAGGCAAGATTAGACACAAGAACATTGTTAAGCTGTGGTGTTGCTGCACCACCAGGGACTGCAAGCTTTTGGTTTATGAATATATGCTAAATGGTAGTCTTGGTGATTTGCTACATAGCAGCAAAGGAGGGTTGTTGGATTGGCCAACTAGATACAAGATTGCGGTTGATGCTGCAGAAGGCCTCTCTTATCTGCATCATGACTGTGTTCCCCCAATTGTTCATAGAGATGTGAAATCTAACAATATATTGTTGGATGGCGACTTTGGTGCAAGGGTGGCAGATTTTGGAGTAGCCAAGGTAGTTGAAACCACAACAATTGGAGCCAAATCCATGTCTGTCATAGCTGGGTCTTGTGGCTATATTGCACCAGGTTAG 2607 0.4538 MLPMFLLILFSILSSPLTILSLNQEALYLYQFKLLLDDPNSHLSSWNPLDPTPCNWYGVTCSTTTTTVTTIDLSNTNIEGPFPTTILCRLPNLSSITLFNNSIDQTLSPDISLCRNLIHLDLSQNLLTGPLPATLPQLPNLKYLDLSGNNFSGSIPESFGTFQKLEVISLVYNLIQGTIPPSLGNITTLKMLNLSYNPFFPGRIPPEFGNLTNLQVLWLTHCNLVGLIPDSLGELKKLEDLDLALNDLYGSIPSSLTELTSLKQLELYNNSLSGELPRSMGNLTSLRLFDASMNHLTGKIPDELCSLPLESLNLYENRFHGELPASIANSPNLYELRLFGNRLTGKLPENLGKHSPLRWLDVSSNQFYGSIPATLCDFGVLEELLVIYNLFSGKIPASLGTCQSLTRVRLGFNRFSGEVPAGIWGLPHVYLLELADNSFSGSISKTIAGATNLSLLFLSNNNFTGPIPNEIGWLEGLVELSGSNNMFSGSLPDSVVNLGQLGTLDLHNNKLSGELPKGIHSWKKLNELNLANNEIGGKIPDGIGSLTVLNFLDLSNNKISGNVPRGLQNLKLNQLNLSYNHLSGELPPLLAKDMYRTSFLGNPGLCRDLRGLCDGRSDEKSAGYIWLLRTIFVAATLVLFVGVVWFYFKYKSLKYARAIDKSRWTLMSFHKLGFGDDEIFNFLDEDNMIGSGASGKVFKVVLGNGETVAVKKIWGRAKKEVESGDLENRGRVEDTTFDAEVDTLGKIRHKNIVKLWCCCTTRDCKLLVYEYMLNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETTTIGAKSMSVIAGSCGYIAPG* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0738 868 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 867 - -
Lan6g0738 868 SUPERFAMILY L domain-like 34 382 - -
Lan6g0738 868 SMART LRR_typ_2 546 569 IPR003591 -
Lan6g0738 868 SMART LRR_typ_2 211 234 IPR003591 -
Lan6g0738 868 SMART LRR_typ_2 259 283 IPR003591 -
Lan6g0738 868 SMART LRR_typ_2 498 521 IPR003591 -
Lan6g0738 868 SMART LRR_typ_2 90 114 IPR003591 -
Lan6g0738 868 SMART LRR_typ_2 138 161 IPR003591 -
Lan6g0738 868 Gene3D Ribonuclease Inhibitor 280 357 IPR032675 -
Lan6g0738 868 Gene3D Ribonuclease Inhibitor 476 611 IPR032675 -
Lan6g0738 868 Gene3D Ribonuclease Inhibitor 358 475 IPR032675 -
Lan6g0738 868 Gene3D Ribonuclease Inhibitor 177 279 IPR032675 -
Lan6g0738 868 Gene3D Ribonuclease Inhibitor 22 176 IPR032675 -
Lan6g0738 868 ProSiteProfiles Protein kinase domain profile. 683 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0738 868 SUPERFAMILY L domain-like 309 606 - -
Lan6g0738 868 SMART serkin_6 683 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0738 868 Gene3D Phosphorylase Kinase; domain 1 671 771 - -
Lan6g0738 868 ProSitePatterns Protein kinases ATP-binding region signature. 689 719 IPR017441 GO:0005524
Lan6g0738 868 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Lan6g0738 868 Gene3D Transferase(Phosphotransferase) domain 1 772 868 - -
Lan6g0738 868 Pfam Leucine Rich Repeat 213 235 IPR001611 GO:0005515
Lan6g0738 868 PANTHER LRR RECEPTOR-LIKE KINASE 5 867 - -
Lan6g0738 868 Pfam Protein kinase domain 685 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0738 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Lan6g0738 868 Pfam Leucine Rich repeats (2 copies) 116 155 IPR025875 -
Lan6g0738 868 SUPERFAMILY Protein kinase-like (PK-like) 680 867 IPR011009 -
Lan6g0738 868 SMART LRR_sd22_2 211 243 - -
Lan6g0738 868 SMART LRR_sd22_2 546 572 - -
Lan6g0738 868 SMART LRR_sd22_2 162 188 - -
Lan6g0738 868 SMART LRR_sd22_2 259 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0738 Lan-Chr6 6701153 6704007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0738 18 867 Receptor kinase-like Gene Family AT1G28440 69.484 0.0 1203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan6g0738 Pkinase 1.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0738 - - gmx:100819887 1399.8