Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0735 ATGGATTCTGATTTTTGGACCTCGCGCATTGCCGCTGCCAAACGCCAATATGCGCTTCAGTATCATCATCCAAGTTCCCACTTAGATCGGTTGGGAATCGACGATTTCGAGGCTGAAGAAGAGGTGCGACCTGATTTCCCGTGTCCGTATTGTTACGAAGACTTTGACATAGCGTCTTTGTGTTCGCATCTAGAAGACGAACATTCATGTGAATCAAGAGTCACGAGTTGTCCTATATGCTCAGTTAAAGTTGCACGGGACATGTTGAGTCACATAACGCTACAACATGGGCATTTATTTAAGAGAAGGCGCAGGTTAAGAAGGGTTGCTATTCCAAACAGTCAGACATTGTCTCTTTTAGGGCGAGATCTTCGTGAGGCTCATTTACAGGTGCTCCTTGGTGGCAGTAGTGGCGGATATCGGGCAAACAATGCTACAGTATCTAATGCAGCTACTGATCCATTCCTATCCTCTCTTATTTTAAATTTCCCTGCTTGTGAAGCAGAAGAAATCTCTAAATCTGTGGTAACAAGCTCTGAAGATTCTTCTGCAAAGAATGCAGCACCTATACATATTTGGAAATCAAGTTTTGATTCTTCCTTGACTGTTGAAGAGAGGGAGAAAAGGATGAGACAATCTGCTGGGAGATCTGGTTTTATGCAGGATTTGTTTCTTTCAACTTTGTTAGATGACTAA 696 0.4296 MDSDFWTSRIAAAKRQYALQYHHPSSHLDRLGIDDFEAEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTSCPICSVKVARDMLSHITLQHGHLFKRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGSSGGYRANNATVSNAATDPFLSSLILNFPACEAEEISKSVVTSSEDSSAKNAAPIHIWKSSFDSSLTVEEREKRMRQSAGRSGFMQDLFLSTLLDD* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0735 231 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Lan6g0735 231 Pfam Stress-induced protein Di19, C-terminal 117 228 IPR027935 -
Lan6g0735 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 96 IPR013083 -
Lan6g0735 231 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 230 - -
Lan6g0735 231 SUPERFAMILY TRAF domain-like 46 103 - -
Lan6g0735 231 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 230 IPR033347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0735 Lan-Chr6 6670940 6674235 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan6g0735 Di19_C 2.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0735 - - gmx:100792230 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0558 18 10467112 10470598 Lan6g0735 6 6670940 6674235 LSH