Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0708 ATGGTAATGGTGAGATGGAGCAGCTGGTCGGAGCTACTCCTAGGTGGAGCTGTAGTGAGGCACGGGACCCAAGACTGGCCCATCATCGCGGCGGAGCTCCGAACCCGAACCGTTTCTCCGGACACTTTCACTCCCGAGGTCTGTAAAGCCAAATATCAAGAGTTGCTAAAGCGATATTCCGGGAGCAAGGCTTGGTTTGAGGAGCTGAAAAAGGAAGGGATGGCAGAGCTTAAGAGAGCTTTGGAGCAATCTGAAAAATCAATTGGGTCTCTTAAATTGAAGCTTGAATTCCTTAAGACCGAGAAGAATGAGACAAAAAGTGATTGTCATGTTGACAATGTCCCGGCTGGACCAGAATTACACGTTCCTTCACAGAATTTGGAGAGAGTGGAATCATCCAATAAAGAGACTTCAAAGGATGGGCTATCTGCTGGGAGTTTCACGCATGAAACCGGGACAAACTGGTCTCCTGAAGGTACCCGGTCTGCTGAACACGAGAAAGTTTTGAATGTTATTAAGTTGGAAGATCCTATAGGTGAAGGACAGGTCGGGGGCTTAAAAAAGCTAAGAGGGAAGAGGAGGAGGAAGGATTCTGACAGTAATATTAATAAAAGAAGTGTTCGAGAAAGTGATGTGTTACATTCAGTAGATGTGTCCGGATATAAAGAAAGTTCAACTAGCAACAGTGATGAGATTGCAAAATTTTGTAGCAAAGATAAAAAGAATTATAACTTGAGAAAGGATGGAATGAAGGATATCATGGAGATTCTGGATTATATTTTGCAATCTAAGGGTGCTTCTTCTTTCCATCGCAAACATGATAGCCAGAAAAGAGGCAGGTACAGGAGCATGATTCGGCAGCACATGGACCTTGACACTATAAGGTTAAGAATTAGCAACCGAACGATTAAGTCGGTCATGGAACTTTTCAGAGACTTATATCTACTCATCAACAATGCTCTAGTCTTCTACTCCAAGAGCACTCGCCAGTATAAAAATGCTCAATTGCTTAAAGACATCGTCAATGAAACATTAAAAGAATGCATCAAAGATTTTAGAAGCAATGTCACCAATGCTGATGTCTCTATCACATTACCTGTCGACGAGCCTCCCCTGAAACTCAGAAGTGTATGCCCTGGTAACCGGAAGGTTGTCGCAAAGGAAGCCGGTGGTGGCAGCAAGTCTGCTTCTGAGATCTCACAGGGAGCTAAGGTACCCAGCAAAGTGAATCTCCCCCTTTCAGAGGAATCCTTGCCCATCAAGAAATCTTTCGGTCGATCGAAAAAGGTCGGACGTGAAACTACAGGAAGTCAGAGACCCGCAACACCAATGAAGAGAAGGAGAACAGTGAAAACAAAAGATGATAATGCTGAGGATTTGGTTCCAACTCAAGCTTATCCATTAGGTCTTTAA 1413 0.4388 MVMVRWSSWSELLLGGAVVRHGTQDWPIIAAELRTRTVSPDTFTPEVCKAKYQELLKRYSGSKAWFEELKKEGMAELKRALEQSEKSIGSLKLKLEFLKTEKNETKSDCHVDNVPAGPELHVPSQNLERVESSNKETSKDGLSAGSFTHETGTNWSPEGTRSAEHEKVLNVIKLEDPIGEGQVGGLKKLRGKRRRKDSDSNINKRSVRESDVLHSVDVSGYKESSTSNSDEIAKFCSKDKKNYNLRKDGMKDIMEILDYILQSKGASSFHRKHDSQKRGRYRSMIRQHMDLDTIRLRISNRTIKSVMELFRDLYLLINNALVFYSKSTRQYKNAQLLKDIVNETLKECIKDFRSNVTNADVSITLPVDEPPLKLRSVCPGNRKVVAKEAGGGSKSASEISQGAKVPSKVNLPLSEESLPIKKSFGRSKKVGRETTGSQRPATPMKRRRTVKTKDDNAEDLVPTQAYPLGL* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0708 470 Pfam Bromodomain 254 335 IPR001487 GO:0005515
Lan6g0708 470 PANTHER BROMODOMAIN PROTEIN 2 452 - -
Lan6g0708 470 MobiDBLite consensus disorder prediction 107 162 - -
Lan6g0708 470 MobiDBLite consensus disorder prediction 416 470 - -
Lan6g0708 470 MobiDBLite consensus disorder prediction 182 208 - -
Lan6g0708 470 SMART bromo_6 246 350 IPR001487 GO:0005515
Lan6g0708 470 CDD SANT 5 56 IPR001005 -
Lan6g0708 470 Coils Coil 74 108 - -
Lan6g0708 470 MobiDBLite consensus disorder prediction 126 159 - -
Lan6g0708 470 CDD Bromodomain 250 345 - -
Lan6g0708 470 ProSiteProfiles Bromodomain profile. 261 331 IPR001487 GO:0005515
Lan6g0708 470 SUPERFAMILY Bromodomain 238 351 IPR036427 GO:0005515
Lan6g0708 470 Gene3D - 242 362 IPR036427 GO:0005515
Lan6g0708 470 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 2 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0708 Lan-Chr6 6266784 6271986 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0708 - - gmx:100804245 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0685 17 6032420 6037594 Lan6g0708 6 6266784 6271986 LSH
Lan6g0708 6 6266784 6271986 Lan4g0700 4 9418172 9422121 PCT
Lan6g0708 6 6266784 6271986 Lan19g0965 19 17035033 17038426 PCT
Lan4g0700 4 9418172 9422121 Lan6g0708 6 6266784 6271986 PCT
Lan19g0965 19 17035033 17038426 Lan6g0708 6 6266784 6271986 PCT