Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan6g0700 | ATGAAAATAATCAACCGATACAAAGATACTCTTGTTCTGTTCTCTTTCTTATCAGTCTTCTGTTTTCATACTCTGTTCACACATGCAGCTGATTCCATCACACAAGGAGAATTTATCAAAGATGGTGATACTCTTGTGTCAAATGGACTTAACTTCGAAATGGGTTTCTTCAGTTTTAATGATTCATCTTCAAGATACGTTGGAATATGGTACTACAATGTTTCTGTCCCAGCATATATATGGGTTGCAAATAGAGGAAAACCCATCGAAGGTAGAGAAGGTTTGATACAAATGAAAAATGATGGTAACTTGGTTGTTCTTGATGAAAATAAAAATGAAGTGTGGTCTACTTACTTGTCAAATCCCATGAATAACTCAAAAGTTGTTCTTCAAGATGATGGAAACCTTGTCCTTTCAAAAGAAGACGATGGTGATTTATTATGGCAAAGTTTTGATCACCCAACTGATACATTTTTACCAGGTATGAAGATTCCAGTGAGTGATGAAATGAAGGACACTATTATTTTTACATCATGGAGATCAAAAACTGATCCTTCTTTTGGAAATTACACTGTGGGGATTGATTCCAAGACATCATCCCCACAAATAGTGATTTGGGAAGGAGAAGAAAAAATGTGGAGAAGTGGTTATTGGGATGGTAGATTATTCACAGGTGTGTCCAATATGACAGGGTATTATCAATTTGGTTTTAGACTTAACGGGGATGAAAAAGAAGAAAGGTACTTTACATTTAGGAAATTGAACGAGAGTGATAAGGTAATGTTTAAGATAGATTGGGATGGATATGAAAGAATGTATAAGTGGAATGAAAATGAGAAACTATGGAATGTGATGCAAAAGGAGCCTGTTAATAAGTGTGAGTTTTATAACCATTGTGGCAGTTTTGGAGTATGTGATATGTCTAATTCACCTATATGTGGTTGCATGAAAGGGTTTGAACCAAGGGATAAGGATGATTGGAAGAATGAGAATTGGTCTGGAGGGTGTAAGAGGAGAACTCCACTTAAGGCTGAGATAGTTAATGGTTCTGGAAGTGTTGGAGAAGATGGTTTCTTGGTGCAAAAGTGTATGAAGTTTCCGGATCTGGCACAGTTAGTTAATGATGGCAATGGCATTGTTCATGACAGTGAGGGCTGTGAGGCTACTTGTCTGCAGAATATTAATTGTACTGCATATGCATATGTTCTTGGAATAGGATGCATGGTTTGGTATGGGGAGTTAGTTGATGTTCAAAACCAGGATAACCTTGGAAATAAAATGAGCATCCGTCTTGCGAATTCCGAGTTAGGTGATGGTGACAAGAAGACCAAAATTTGGATAATAATATCAGCTGTTGTGGGGGTTCTAGTATGCCTTGGAATCTTTGTATGGTTGATGTTAAGGTTCAAGAGAAAACTCAAAGCTTCTCGTAGCAAGAATAGCAATCTAATAGTCTCAGGAGGAATCAAGAGTAGAGAATTTTCAGCAGCATTTTCAGAATCAACTGAAGCCTATAGTTTGGAAGTGAATAAACTTAGTGGACCAGAACTACCAGTGTTCAATTTTAGTTACATTGCAATAGCCACAGATGATTTCTCAGAAGAAAATAAGCTTGGGCAAGGGGGATTTGGTCCTGTCTATAAGGGGGAACTTCCAGGGGGTGAACAAATAGCTGTGAAGAAGCTTTCAAAGCGGTCTAGCCAAGGTTCAGAGGAATTCAAGAATGAAATGATGCTAATAGCAAAACTACAACATAGAAATCTGGTTAGACTAATTGGATGTTCCATTCAAGGGGAAGAAAAGTTATTGGTATATGAATATATGCCAAACAAAAGCTTGGACTTCTTTTTATTTGATCCAGTAAAGCAAGCACAACTAGATTGGACAAAACGCTTTGAAATCATTGAAGGCATTGCACTAGGGCTACTTTATCTGCACCGAGATTCAAGACTAAGAATAATTCACCGAGATCTAAAAGCAAGCAACATTTTGTTAGACGAAGACATGAATCCAAAAATTTCGGACTTTGGGTTGGCAAGAATATTTGGGGGAAACCAGGATGAAGCCAGTACAAATAGAGTGGTTGGTACATATGGCTACATGGCCCCAGAATATGCAATGGAAGGTCTATTTTCAATCAAATCTGACGTCTATAGTTTTGGTGTATTGTTGCTAGAGATTATCAGCGGCCGCAGGAACACTAGCTTTCGTCACACAGATGATTCAAGTCTCATAGGATATGCTTGGCATCTTTGGAGTGAAGAAAGAGTATTTGAGCTTGTTGATCCTTCCATTCGTGATTCAAGTCCAAAAAATAATGTTTTGAGGTGCATACATATAGGAATGTTATGTGTACAAGATTCAGCAGCTCGTAGACCAAACATGTCTTCTGTGTTATTGATGCTGGAAAGTGAAGCAACAACTCTTCCCTTGCCTAAGCAACCTTTGATGGTAACTTCCATGAGAAGATATGATGATGTAGAAGTTCATACAGAATGTCTTGATGTTTCAAATGATTTGACAGTTACAATGGTAACAGGGAGATAG | 2547 | 0.3777 | MKIINRYKDTLVLFSFLSVFCFHTLFTHAADSITQGEFIKDGDTLVSNGLNFEMGFFSFNDSSSRYVGIWYYNVSVPAYIWVANRGKPIEGREGLIQMKNDGNLVVLDENKNEVWSTYLSNPMNNSKVVLQDDGNLVLSKEDDGDLLWQSFDHPTDTFLPGMKIPVSDEMKDTIIFTSWRSKTDPSFGNYTVGIDSKTSSPQIVIWEGEEKMWRSGYWDGRLFTGVSNMTGYYQFGFRLNGDEKEERYFTFRKLNESDKVMFKIDWDGYERMYKWNENEKLWNVMQKEPVNKCEFYNHCGSFGVCDMSNSPICGCMKGFEPRDKDDWKNENWSGGCKRRTPLKAEIVNGSGSVGEDGFLVQKCMKFPDLAQLVNDGNGIVHDSEGCEATCLQNINCTAYAYVLGIGCMVWYGELVDVQNQDNLGNKMSIRLANSELGDGDKKTKIWIIISAVVGVLVCLGIFVWLMLRFKRKLKASRSKNSNLIVSGGIKSREFSAAFSESTEAYSLEVNKLSGPELPVFNFSYIAIATDDFSEENKLGQGGFGPVYKGELPGGEQIAVKKLSKRSSQGSEEFKNEMMLIAKLQHRNLVRLIGCSIQGEEKLLVYEYMPNKSLDFFLFDPVKQAQLDWTKRFEIIEGIALGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGLARIFGGNQDEASTNRVVGTYGYMAPEYAMEGLFSIKSDVYSFGVLLLEIISGRRNTSFRHTDDSSLIGYAWHLWSEERVFELVDPSIRDSSPKNNVLRCIHIGMLCVQDSAARRPNMSSVLLMLESEATTLPLPKQPLMVTSMRRYDDVEVHTECLDVSNDLTVTMVTGR* | 849 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan6g0700 | 848 | ProSiteProfiles | Bulb-type lectin domain profile. | 30 | 151 | IPR001480 | - | |
Lan6g0700 | 848 | Pfam | S-locus glycoprotein domain | 213 | 322 | IPR000858 | GO:0048544 | |
Lan6g0700 | 848 | PIRSF | SRK | 4 | 848 | IPR024171 | GO:0004674 | |
Lan6g0700 | 848 | Pfam | Protein tyrosine and serine/threonine kinase | 535 | 799 | IPR001245 | GO:0004672|GO:0006468 | |
Lan6g0700 | 848 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 79 | 185 | IPR036426 | - | |
Lan6g0700 | 848 | SUPERFAMILY | Protein kinase-like (PK-like) | 517 | 832 | IPR011009 | - | |
Lan6g0700 | 848 | CDD | B_lectin | 37 | 154 | IPR001480 | - | |
Lan6g0700 | 848 | Pfam | PAN-like domain | 354 | 417 | IPR003609 | - | |
Lan6g0700 | 848 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 5 | 848 | - | - | |
Lan6g0700 | 848 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 653 | 665 | IPR008271 | GO:0004672|GO:0006468 | |
Lan6g0700 | 848 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE | 5 | 848 | - | - | |
Lan6g0700 | 848 | Gene3D | Transferase(Phosphotransferase) domain 1 | 608 | 810 | - | - | |
Lan6g0700 | 848 | ProSiteProfiles | PAN/Apple domain profile. | 363 | 432 | IPR003609 | - | |
Lan6g0700 | 848 | SMART | serkin_6 | 532 | 802 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan6g0700 | 848 | CDD | PAN_AP_plant | 348 | 432 | - | - | |
Lan6g0700 | 848 | SMART | blect_4 | 36 | 154 | IPR001480 | - | |
Lan6g0700 | 848 | ProSiteProfiles | Protein kinase domain profile. | 532 | 817 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan6g0700 | 848 | CDD | STKc_IRAK | 538 | 803 | - | - | |
Lan6g0700 | 848 | Gene3D | - | 24 | 152 | IPR036426 | - | |
Lan6g0700 | 848 | Pfam | D-mannose binding lectin | 79 | 180 | IPR001480 | - | |
Lan6g0700 | 848 | Gene3D | Phosphorylase Kinase; domain 1 | 493 | 607 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan6g0700 | Lan-Chr6 | 6178275 | 6182432 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan6g0700 | 450 | 815 | Receptor kinase-like Gene Family | AT4G23230 | 55.586 | 3.18e-132 | 407 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Lan6g0700 | PK_Tyr_Ser-Thr | 4.2e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan6g0700 | - | - | cam:101504189 | 1171.38 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan6g0700 | 6 | 6178275 | 6182432 | Lan19g0993 | 19 | 17274042 | 17278100 | PCT | |
Lan4g0715 | 4 | 9501964 | 9505962 | Lan6g0700 | 6 | 6178275 | 6182432 | PCT | |
Lan19g0991 | 19 | 17266611 | 17270456 | Lan6g0700 | 6 | 6178275 | 6182432 | PCT |