Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0700 ATGAAAATAATCAACCGATACAAAGATACTCTTGTTCTGTTCTCTTTCTTATCAGTCTTCTGTTTTCATACTCTGTTCACACATGCAGCTGATTCCATCACACAAGGAGAATTTATCAAAGATGGTGATACTCTTGTGTCAAATGGACTTAACTTCGAAATGGGTTTCTTCAGTTTTAATGATTCATCTTCAAGATACGTTGGAATATGGTACTACAATGTTTCTGTCCCAGCATATATATGGGTTGCAAATAGAGGAAAACCCATCGAAGGTAGAGAAGGTTTGATACAAATGAAAAATGATGGTAACTTGGTTGTTCTTGATGAAAATAAAAATGAAGTGTGGTCTACTTACTTGTCAAATCCCATGAATAACTCAAAAGTTGTTCTTCAAGATGATGGAAACCTTGTCCTTTCAAAAGAAGACGATGGTGATTTATTATGGCAAAGTTTTGATCACCCAACTGATACATTTTTACCAGGTATGAAGATTCCAGTGAGTGATGAAATGAAGGACACTATTATTTTTACATCATGGAGATCAAAAACTGATCCTTCTTTTGGAAATTACACTGTGGGGATTGATTCCAAGACATCATCCCCACAAATAGTGATTTGGGAAGGAGAAGAAAAAATGTGGAGAAGTGGTTATTGGGATGGTAGATTATTCACAGGTGTGTCCAATATGACAGGGTATTATCAATTTGGTTTTAGACTTAACGGGGATGAAAAAGAAGAAAGGTACTTTACATTTAGGAAATTGAACGAGAGTGATAAGGTAATGTTTAAGATAGATTGGGATGGATATGAAAGAATGTATAAGTGGAATGAAAATGAGAAACTATGGAATGTGATGCAAAAGGAGCCTGTTAATAAGTGTGAGTTTTATAACCATTGTGGCAGTTTTGGAGTATGTGATATGTCTAATTCACCTATATGTGGTTGCATGAAAGGGTTTGAACCAAGGGATAAGGATGATTGGAAGAATGAGAATTGGTCTGGAGGGTGTAAGAGGAGAACTCCACTTAAGGCTGAGATAGTTAATGGTTCTGGAAGTGTTGGAGAAGATGGTTTCTTGGTGCAAAAGTGTATGAAGTTTCCGGATCTGGCACAGTTAGTTAATGATGGCAATGGCATTGTTCATGACAGTGAGGGCTGTGAGGCTACTTGTCTGCAGAATATTAATTGTACTGCATATGCATATGTTCTTGGAATAGGATGCATGGTTTGGTATGGGGAGTTAGTTGATGTTCAAAACCAGGATAACCTTGGAAATAAAATGAGCATCCGTCTTGCGAATTCCGAGTTAGGTGATGGTGACAAGAAGACCAAAATTTGGATAATAATATCAGCTGTTGTGGGGGTTCTAGTATGCCTTGGAATCTTTGTATGGTTGATGTTAAGGTTCAAGAGAAAACTCAAAGCTTCTCGTAGCAAGAATAGCAATCTAATAGTCTCAGGAGGAATCAAGAGTAGAGAATTTTCAGCAGCATTTTCAGAATCAACTGAAGCCTATAGTTTGGAAGTGAATAAACTTAGTGGACCAGAACTACCAGTGTTCAATTTTAGTTACATTGCAATAGCCACAGATGATTTCTCAGAAGAAAATAAGCTTGGGCAAGGGGGATTTGGTCCTGTCTATAAGGGGGAACTTCCAGGGGGTGAACAAATAGCTGTGAAGAAGCTTTCAAAGCGGTCTAGCCAAGGTTCAGAGGAATTCAAGAATGAAATGATGCTAATAGCAAAACTACAACATAGAAATCTGGTTAGACTAATTGGATGTTCCATTCAAGGGGAAGAAAAGTTATTGGTATATGAATATATGCCAAACAAAAGCTTGGACTTCTTTTTATTTGATCCAGTAAAGCAAGCACAACTAGATTGGACAAAACGCTTTGAAATCATTGAAGGCATTGCACTAGGGCTACTTTATCTGCACCGAGATTCAAGACTAAGAATAATTCACCGAGATCTAAAAGCAAGCAACATTTTGTTAGACGAAGACATGAATCCAAAAATTTCGGACTTTGGGTTGGCAAGAATATTTGGGGGAAACCAGGATGAAGCCAGTACAAATAGAGTGGTTGGTACATATGGCTACATGGCCCCAGAATATGCAATGGAAGGTCTATTTTCAATCAAATCTGACGTCTATAGTTTTGGTGTATTGTTGCTAGAGATTATCAGCGGCCGCAGGAACACTAGCTTTCGTCACACAGATGATTCAAGTCTCATAGGATATGCTTGGCATCTTTGGAGTGAAGAAAGAGTATTTGAGCTTGTTGATCCTTCCATTCGTGATTCAAGTCCAAAAAATAATGTTTTGAGGTGCATACATATAGGAATGTTATGTGTACAAGATTCAGCAGCTCGTAGACCAAACATGTCTTCTGTGTTATTGATGCTGGAAAGTGAAGCAACAACTCTTCCCTTGCCTAAGCAACCTTTGATGGTAACTTCCATGAGAAGATATGATGATGTAGAAGTTCATACAGAATGTCTTGATGTTTCAAATGATTTGACAGTTACAATGGTAACAGGGAGATAG 2547 0.3777 MKIINRYKDTLVLFSFLSVFCFHTLFTHAADSITQGEFIKDGDTLVSNGLNFEMGFFSFNDSSSRYVGIWYYNVSVPAYIWVANRGKPIEGREGLIQMKNDGNLVVLDENKNEVWSTYLSNPMNNSKVVLQDDGNLVLSKEDDGDLLWQSFDHPTDTFLPGMKIPVSDEMKDTIIFTSWRSKTDPSFGNYTVGIDSKTSSPQIVIWEGEEKMWRSGYWDGRLFTGVSNMTGYYQFGFRLNGDEKEERYFTFRKLNESDKVMFKIDWDGYERMYKWNENEKLWNVMQKEPVNKCEFYNHCGSFGVCDMSNSPICGCMKGFEPRDKDDWKNENWSGGCKRRTPLKAEIVNGSGSVGEDGFLVQKCMKFPDLAQLVNDGNGIVHDSEGCEATCLQNINCTAYAYVLGIGCMVWYGELVDVQNQDNLGNKMSIRLANSELGDGDKKTKIWIIISAVVGVLVCLGIFVWLMLRFKRKLKASRSKNSNLIVSGGIKSREFSAAFSESTEAYSLEVNKLSGPELPVFNFSYIAIATDDFSEENKLGQGGFGPVYKGELPGGEQIAVKKLSKRSSQGSEEFKNEMMLIAKLQHRNLVRLIGCSIQGEEKLLVYEYMPNKSLDFFLFDPVKQAQLDWTKRFEIIEGIALGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGLARIFGGNQDEASTNRVVGTYGYMAPEYAMEGLFSIKSDVYSFGVLLLEIISGRRNTSFRHTDDSSLIGYAWHLWSEERVFELVDPSIRDSSPKNNVLRCIHIGMLCVQDSAARRPNMSSVLLMLESEATTLPLPKQPLMVTSMRRYDDVEVHTECLDVSNDLTVTMVTGR* 849
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0700 848 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Lan6g0700 848 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Lan6g0700 848 PIRSF SRK 4 848 IPR024171 GO:0004674
Lan6g0700 848 Pfam Protein tyrosine and serine/threonine kinase 535 799 IPR001245 GO:0004672|GO:0006468
Lan6g0700 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 185 IPR036426 -
Lan6g0700 848 SUPERFAMILY Protein kinase-like (PK-like) 517 832 IPR011009 -
Lan6g0700 848 CDD B_lectin 37 154 IPR001480 -
Lan6g0700 848 Pfam PAN-like domain 354 417 IPR003609 -
Lan6g0700 848 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 5 848 - -
Lan6g0700 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Lan6g0700 848 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 5 848 - -
Lan6g0700 848 Gene3D Transferase(Phosphotransferase) domain 1 608 810 - -
Lan6g0700 848 ProSiteProfiles PAN/Apple domain profile. 363 432 IPR003609 -
Lan6g0700 848 SMART serkin_6 532 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0700 848 CDD PAN_AP_plant 348 432 - -
Lan6g0700 848 SMART blect_4 36 154 IPR001480 -
Lan6g0700 848 ProSiteProfiles Protein kinase domain profile. 532 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0700 848 CDD STKc_IRAK 538 803 - -
Lan6g0700 848 Gene3D - 24 152 IPR036426 -
Lan6g0700 848 Pfam D-mannose binding lectin 79 180 IPR001480 -
Lan6g0700 848 Gene3D Phosphorylase Kinase; domain 1 493 607 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan6g0700 Lan-Chr6 6178275 6182432 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0700 450 815 Receptor kinase-like Gene Family AT4G23230 55.586 3.18e-132 407
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan6g0700 PK_Tyr_Ser-Thr 4.2e-49 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0700 - - cam:101504189 1171.38
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0700 6 6178275 6182432 Lan19g0993 19 17274042 17278100 PCT
Lan4g0715 4 9501964 9505962 Lan6g0700 6 6178275 6182432 PCT
Lan19g0991 19 17266611 17270456 Lan6g0700 6 6178275 6182432 PCT