Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0697 ATGGGATGTGTCACTAGCCTCCTCAACACCTTCCTCTTTTGCTTCTCAACTTTACTCATTTTTCTCTCCACAATCTCAATCTCCACAGATACCTTAACAACAACCCAATCCCTCACAACCAACCAAACCCTTTCATCACCACAGGGAATTTTTGAGCTGGGTTTCTTTTCTTACACCAATTCCACATGGTACTTAGCCATATGGTACAAAAACATAGATCATAAAACAGTGGTTTGGGTAGCAAACAGAGACACACCACTTGAAAATCCCACAGGATTTCTTAAAATAGGTGACAAAGGAAACAACATAGTTCTCATAGATCAATCCTTACATCAAATATGGTCCTCCTCAAACCAAACCACAACAACAACAACATCTACTAGGAACTCAATTCTTCAGCTTTTGGATTCTGGAAACTTGGTTCTCAAAGAATCAAATGAAAATTACCCTACAAAGTTTCTGTGGCAAAGCTTTGATTACCCTACAGATACTTTGTTACCTGGAATGAAGCTAGGGTGGAACTTAGACACAGGAATGGAGAGGCATATAACATCATGGAAGATCAAAGATAAAGACCCTTCAAGTGGAGATTTATCTTTCAAGCTAAATTACCATGGTCTCCCAGAGATTTTTCTTTGGAACAAAGATCAAATAATATATAGAAGTGGACCTTGGAATGGTGAGAGATTCAGTGGGGTACCAGAGATGCAACCTACAACAAATTCTATTAAATTCATCTTTCATGTTGATGAACATGAGGTATACTATAGTTTCTCTATTGAGAACCAAATTTTGTTTTCAAGACTCTTTGTGAGTCCAATTGGTGAACTTCAAAGGCTTACTTGGATCAAAACCACACAAGTTTGGAACAAATTTTGGTATGCACCTAAAGACCAATGTGATGATTATAGAATGTGTGGTCCATATGGTATATGTGACACTAATGCTTCACCAGTTTGTCAGTGTGTGAAGGGTTTCCACCCCAAGAATCAGCAAAATTGGAATTTGAGATATGGTTCTGATGGTTGTGTAAGGAACAAAGAATTAGATTGTGAGAGTGACAAGTTTTTTAAGCTACATAATGTAAAATTGCCAGAGACAACCTTGGTGCTTGTAAACAGGAGTATGAACCTTGTGGAATGTGAAGATTTGTGTCATAAGAATTGTTCTTGCACTGCTTATGCTAACATTGAAATTACCAATGGAGGAAGTGGTTGTGTGATTTGGATTGGTGAGCTTATAGATATGAGGCAGTACCCTGCAGGAGGACAAGATATTTATGTCAGATTAGCAGCTTCAGATGTAGGGTTTGGAGGTGGTTCTAACGGGACAAATTCTACAGCCAAGGTAGCAGGCATTATAGTTGGAGGTGCAGCATTAATACTTTTGGCATTGGGTTTCTTTTTGTTATGGAAGAAGAATAAATTGCAATGCATATTAAAAGGGAAGACAGAACATAGAGGTTCTTTAGAGAGAAGTCATGAGTTTCTAATGCCTGAGGTTGGATTTTCAAGTAAAAGAGAGCAGTCAAGTGAAAGTAACATAGATGATCTAGAGTTGCCATTGTTTGATTTTAATACCATAACAATAGCTACAAACAATTTTTCAGAACATAATAAACTTGGACAAGGAGGCTTTGGTGTTGTTTACAAAGGGATATTGATTGAAGGCCAGGAAATTGCTGTGAAGAGATTATCAAAGAATTCTGGGCAAGGAATTGAAGAATTTAAGAATGAGGTCAAATTGCTTGTCAAGCTTCAACACCGAAATCTTGTTCGATTGCTTGGTTGCAGCATTCAAATGGATGAGAAGATGTTGGTGTATGAATACATGGAAAATAGAAGCCTTGATGGCATTTTGTTTGACAAATCAAAGAGATCCTCATTGGACTGGAATAGGCGCTTCAGCATTATATGCGGAATCGCGAGAGGGCTACTTTATCTGCATCAAGATTCCAGATTTAGGATCATCCACCGAGATCTCAAGGCAAGCAACATTTTACTTGACAAAGAAATGAACCCAAGGATATCAGATTTTGGGATGGCTAGAATTTTTGTTGCTGATCAGACAGAAGCAAATACAATGAGAGTTGTTGGAACATATGGCTATATGTCCCCGGAGTATGCTATGGATGGGATCTTCTCAGTGAAATCTGATGTTTTTAGTTTTGGAGTTCTTGTGCTGGAGATCATAAGTGGAAAAAAGAACAGAGGATTCTATTATGCAAACAAAGAATGGAATCTTCTAGGGCATTCATGGAAGCAATGGATAGAAGGAAATGCATTGGAACTGATTGATTCATCTATTGGAGATTTATATTCACAATCTGAAGTTCTTAGATGCATCCAGGTTGGGCTATTGTGTGTACAAGAGCATGCAGAAGATAGGCCAACAATGTCTTCAGTGGTTTTGATGTTGAGTAGTGAAACTGCAGTAATGGCACAACCCAAAAACCCTGGGTTTTGCTTAGGAAGGAATCTTGCAGAAACTGATTCTTCTTCAAGTAAGCAAGATGAATCATTCACTGTAAACCATGTCACTGTCACAATGCTAGAGGCCAGGTAG 2565 0.3828 MGCVTSLLNTFLFCFSTLLIFLSTISISTDTLTTTQSLTTNQTLSSPQGIFELGFFSYTNSTWYLAIWYKNIDHKTVVWVANRDTPLENPTGFLKIGDKGNNIVLIDQSLHQIWSSSNQTTTTTTSTRNSILQLLDSGNLVLKESNENYPTKFLWQSFDYPTDTLLPGMKLGWNLDTGMERHITSWKIKDKDPSSGDLSFKLNYHGLPEIFLWNKDQIIYRSGPWNGERFSGVPEMQPTTNSIKFIFHVDEHEVYYSFSIENQILFSRLFVSPIGELQRLTWIKTTQVWNKFWYAPKDQCDDYRMCGPYGICDTNASPVCQCVKGFHPKNQQNWNLRYGSDGCVRNKELDCESDKFFKLHNVKLPETTLVLVNRSMNLVECEDLCHKNCSCTAYANIEITNGGSGCVIWIGELIDMRQYPAGGQDIYVRLAASDVGFGGGSNGTNSTAKVAGIIVGGAALILLALGFFLLWKKNKLQCILKGKTEHRGSLERSHEFLMPEVGFSSKREQSSESNIDDLELPLFDFNTITIATNNFSEHNKLGQGGFGVVYKGILIEGQEIAVKRLSKNSGQGIEEFKNEVKLLVKLQHRNLVRLLGCSIQMDEKMLVYEYMENRSLDGILFDKSKRSSLDWNRRFSIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPRISDFGMARIFVADQTEANTMRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIISGKKNRGFYYANKEWNLLGHSWKQWIEGNALELIDSSIGDLYSQSEVLRCIQVGLLCVQEHAEDRPTMSSVVLMLSSETAVMAQPKNPGFCLGRNLAETDSSSSKQDESFTVNHVTVTMLEAR* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0697 854 Pfam Domain of unknown function (DUF3403) 808 854 IPR021820 GO:0004674
Lan6g0697 854 Pfam PAN-like domain 351 416 IPR003609 -
Lan6g0697 854 ProSitePatterns Protein kinases ATP-binding region signature. 541 563 IPR017441 GO:0005524
Lan6g0697 854 ProSiteProfiles Protein kinase domain profile. 535 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0697 854 PANTHER - 16 853 - -
Lan6g0697 854 SMART ntp_6 351 430 IPR003609 -
Lan6g0697 854 Gene3D Hepatocyte Growth Factor 348 428 - -
Lan6g0697 854 Pfam S-locus glycoprotein domain 220 330 IPR000858 GO:0048544
Lan6g0697 854 SUPERFAMILY Protein kinase-like (PK-like) 513 806 IPR011009 -
Lan6g0697 854 Gene3D Phosphorylase Kinase; domain 1 500 610 - -
Lan6g0697 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Lan6g0697 854 PIRSF SRK 2 854 IPR024171 GO:0004674
Lan6g0697 854 SMART serkin_6 535 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0697 854 Gene3D Transferase(Phosphotransferase) domain 1 611 818 - -
Lan6g0697 854 CDD STKc_IRAK 541 806 - -
Lan6g0697 854 CDD B_lectin 44 161 IPR001480 -
Lan6g0697 854 ProSiteProfiles Bulb-type lectin domain profile. 29 155 IPR001480 -
Lan6g0697 854 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 187 IPR036426 -
Lan6g0697 854 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 853 - -
Lan6g0697 854 Pfam Protein tyrosine and serine/threonine kinase 538 804 IPR001245 GO:0004672|GO:0006468
Lan6g0697 854 Gene3D - 23 158 IPR036426 -
Lan6g0697 854 SMART blect_4 35 161 IPR001480 -
Lan6g0697 854 Pfam Receptor serine/threonine kinase 491 525 IPR022126 GO:0004674
Lan6g0697 854 ProSiteProfiles PAN/Apple domain profile. 351 431 IPR003609 -
Lan6g0697 854 Pfam D-mannose binding lectin 76 187 IPR001480 -
Lan6g0697 854 CDD PAN_AP_plant 349 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0697 Lan-Chr6 6164262 6170582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0697 523 854 Receptor kinase-like Gene Family AT4G11530 57.567 7.21e-130 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan6g0697 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0697 - - aprc:113860154 1321.99