Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0674 ATGGCTTCATGCTTGAAACCACCTAGCAATGAAGATGACTCTGTAATACTCTTTTCAACTTCTAATTCTCCTGAATATTCCACCAGTCCCTCTTCTTCTTTCTACCATTCACCACCACCATCATTCAGAACTGCATACAAGCTTTCTATCAAAAACCTCTCCTATACTTTGCACCCACATAACTCCACTCCTTTTCCATTTTGTCACTTCACTAGAAAACCCAAACCAATAACTATACTCAAGTCAGTCTCCTTTGTTGCCAGAAGTTCTGAGATTGTTGCTGTTGTTGGGCCCAGTGGCACAGGGAAGTCTACCCTTCTTCGGGTAATCGCGGGAAGGGTAAAAGATAATGACTTCAATCTTAATAGCATCTCAATCAATGATCAGCCAATGACTAGTCCAGCTCAGTTGAGGAAGATATGTGGCTTTGTGGCACAGGAGGACAACTTGCTTCCTCTTCTAACTGTCAAAGAAACTTTGTTGTTTAGTGCCAAGTTTAGGCTAAAAGAAATGACACCAAAGGATAGAGAAATGAGGGTAGAAAGCTTGATGCAAGAGCTAGGCCTTTTTCATGTTGCACATAATTTTGTTGGGGATAAAGAGAATAGAGGGATATCTGGTGGTGAGAGGAAAAGGGTATCAATTGGAGTTGATATGATTCACAATCCTCCAATTTTACTCCTAGATGAGCCAACATCAGGCCTAGATAGCACTTCAGCTCTCCATGTGATAGAGCTTCTGTCATCAATGGTTAAATCGAAGCGAAGGACAGTGGTTCTATCAATCCACCAACCCAGCTACAGAATATTGCACTACATTTCGAAGTTCTTGATCCTCTCCCATGGTTCAGTTGTTCATAATGGTAGCCTAGAATCACTTGAGGAAGCCATAAGTAAGTTGGGATTTCAAATTCCAATACAACTAAATGCATTAGAATTTTCCATGGAGATTATATGCAGGTTAGAAGAATCCAGTTCAAAACGTGAAACTTCCTCCAACATTGACAAAAAAGAGCCATTTCCAAAACCTATGTGGCCAGAAGATGAAAATGGAGGACTCCAATCAAATTGTAAGAGGGAAAATTTTAGCAGTTTTTGCTATGCAAACTTGATTGAGATATTGTTTCTCTGCTCAAGATTTTGGAAGATAATTTATAGAACAAAGCAGCTTTTCTTGGCAAGAACAATGCAAGCCTTAGTCGGTGGATTTGGGCTAGGAAGTGTTTACATAAAGGTAAGGAATGATGAAGGGGGAGTTGCAGAAAGGTTAGGTCTGTTTGCATTTAGTCTTAGTTTTCTTTTGTCTTCTACAGTTGAAGCACTTCCAATATACCTTCAAGAAAGATGTGTTCTAATGAAAGAGTCTTCAAGAGGAGCCTATAGAATCTCTTCTTACATGATAGCCAACACTTTTGTATTCCTTCCTTTCTTGTTTGTAGTATCTATTCTTTTCGCAGTTCCTGTGTATTGGATTGTAGGACTCAATCCTTCCCTCACTGCCTTCACCTTCTTCACTTTCGTGGTTTGGCTCATCGTACTCATGGCGAGTTCTCTAGTACTCTTCTTAAGCGCAGTGTCTCCAGATTTCATCTCTGGGAATTCCCTCATCTGCACTGTTCTTGGAGCTTTCTTCCTCTTCTCCGGATATTTCATACCGAAGGAGAGCATTCCAAAATATTGGCTTTTCATGTATTATGTGTCCCTTTATAGGTACCCTCTGGATGCGCTCCTCACGAATGAGTACTGGAATGTTAGACATGAGTGTTTCTCACAACATACAACACAGGGATCTCAATGTTTGATTACTGGATTTGATGTGCTCAAGAGTAGAGGACTTGAAAAGGACAATAGGTGGGTGAATGTGGGAATCATGATAGGATTCTTTGTGTTCTATCGTCTGCTTTGTTGGATTATACTCGCTCGAAAGGCCGCCAAGACAACAATATAA 1947 0.4042 MASCLKPPSNEDDSVILFSTSNSPEYSTSPSSSFYHSPPPSFRTAYKLSIKNLSYTLHPHNSTPFPFCHFTRKPKPITILKSVSFVARSSEIVAVVGPSGTGKSTLLRVIAGRVKDNDFNLNSISINDQPMTSPAQLRKICGFVAQEDNLLPLLTVKETLLFSAKFRLKEMTPKDREMRVESLMQELGLFHVAHNFVGDKENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALHVIELLSSMVKSKRRTVVLSIHQPSYRILHYISKFLILSHGSVVHNGSLESLEEAISKLGFQIPIQLNALEFSMEIICRLEESSSKRETSSNIDKKEPFPKPMWPEDENGGLQSNCKRENFSSFCYANLIEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKVRNDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERCVLMKESSRGAYRISSYMIANTFVFLPFLFVVSILFAVPVYWIVGLNPSLTAFTFFTFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYPLDALLTNEYWNVRHECFSQHTTQGSQCLITGFDVLKSRGLEKDNRWVNVGIMIGFFVFYRLLCWIILARKAAKTTI* 649
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0674 648 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 306 IPR003439 GO:0005524
Lan6g0674 648 Gene3D - 50 335 IPR027417 -
Lan6g0674 648 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524
Lan6g0674 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 297 IPR027417 -
Lan6g0674 648 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 3 641 - -
Lan6g0674 648 Pfam ABC transporter 80 233 IPR003439 GO:0005524
Lan6g0674 648 Pfam ABC-2 type transporter 373 581 IPR013525 GO:0016020|GO:0140359
Lan6g0674 648 SMART AAA_5 89 291 IPR003593 -
Lan6g0674 648 Pfam ABC-2 type transporter 263 329 IPR043926 GO:0140359
Lan6g0674 648 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 641 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan6g0674 Lan-Chr6 5980689 5983206 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0674 70 293 Calmodulin-binding Proteins AT2G36910 28.270 1.45e-12 69.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0674 K05681 - gmx:100783883 1050.04