Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0662 ATGGAGGACCAACTCCACCACCACACCAAAAGTACAAACACCACTTCTACCACGCGCTTAAAGCTCTTCGGCTTCAACGTCCACGAAGACACCATCATTGATGACGAACTAGCACCGGTTGAAGAAACATCAGACTCAAACCTAAAACCTACTTCCCCTTCCGGAGACTCAGGTGGCGGCGGCGGAGATGGCGACGCTGCTGGCTTCACAACCTCCTCTGGTGACCGGAAATACGAGTGCCAGTACTGTTGTCGAGAGTTTGCAAACTCACAAGCACTTGGTGGACACCAAAACGCGCACAAGAAAGAGCGCCAACAGCTCAAGCGCGCTCAGTTACAAGCCACGCGAAACGCAGCCGTTTCGTTCGTTCGAAACCCAATCATCTCCGCCTTCTCTCCACCGCCGCATCTCCTCGCTCCGGCAGGTTCCATGATGGTCCCGGCAGGGACATCATCATGGGTCTATATGCAACCACGTGCAGCGCCACCTCCTTTCCACGTGTCAGTTTCACACGGTTGTGTTTTCCCAAACAGTAACAACAACAACGGTACCAGCAGTAATAACTGTAACGGTGGAAGTAACTATAGCTTTATAAGTAGTACAAGATCTGCGGGTGCAGGGTTGTTACCGTACGGTGGAAGAGTAGAGGATTCGTCTTCCGCATTTTCAACGATGGGCTCGCAAGTAGAGGCACGGGCCCACTTAAGTAGAATTGATGGGCCTTCTTCTGTGAGTAGGTTTTCTAAAGGGGAAGTGGGGCCCAGTTTCGATGATGGGTTTGGCTTGGATTTGCACCTTAGCTTAGCGCCCCCGTGA 816 0.5221 MEDQLHHHTKSTNTTSTTRLKLFGFNVHEDTIIDDELAPVEETSDSNLKPTSPSGDSGGGGGDGDAAGFTTSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFSPPPHLLAPAGSMMVPAGTSSWVYMQPRAAPPPFHVSVSHGCVFPNSNNNNGTSSNNCNGGSNYSFISSTRSAGAGLLPYGGRVEDSSSAFSTMGSQVEARAHLSRIDGPSSVSRFSKGEVGPSFDDGFGLDLHLSLAPP* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0662 271 SUPERFAMILY beta-beta-alpha zinc fingers 74 105 IPR036236 -
Lan6g0662 271 MobiDBLite consensus disorder prediction 35 70 - -
Lan6g0662 271 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Lan6g0662 271 Gene3D Classic Zinc Finger 66 125 - -
Lan6g0662 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Lan6g0662 271 PANTHER ZINC FINGER PROTEIN 5 10 270 IPR044299 GO:0010090
Lan6g0662 271 PANTHER ZINC FINGER PROTEIN GIS3 10 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0662 Lan-Chr6 5897101 5898110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0662 12 270 C2H2 Transcription Factor Family AT1G68360 46.667 2.65e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0662 - - gmx:102663095 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0636 18 11439785 11440809 Lan6g0662 6 5897101 5898110 LSH