Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0660 ATGGAAGGTGGCGGAAGCAGAGCCGAAGCCGAGCGGTGGCTCTACACAGCGAACAAGCTCCTTAGCGCGCGTGACTTTCACGGGGCACGATCTTTTGCGGTCCGTGCTCGCGAATCCGACCCGACGTTTGACGCGTCAGAGCTTCTCTTGACGGTGATCGACACCGTCCTCGCCGGCGAGATTCGAATCAATGACCACCACTGCGACTGGTACGGGATCCTCCAGATCCTCCGTTACACCACCAACATCGACCACATCGCCGCCCAGTACCGCCGCCTCGCCCTCCTCCTAGACCCTCACCACAACCCCTTTGCTTTCTCCGGACACGCCTTCTCCCTCGTTCACGACGCTTGGTCCGTCCTCTCCAATCCTGTCAAGAAGTCCATGTACGACAACAACCTCCGGTTGCTCACTTCCCAACCACCACCGCCACAACAACTACAACCGCCACCTCCCCCGACGCAGCCTCAGCCTCAACAAAAGAAGAACCCTAGATCTAAGAACCTTTCTACTGAACCAGCTCCGAGCACCCAAACCGTGACCGAACCGAACGAGTCGACTACGACTGAGTCTGAGGAAGCTAGTTTCTGGACCTCGTGTCCGTACTGTTACGTTATGTATGAGTACCCGAAGGTGTACGAGGAGTGTACCTTACGGTGCCAAAGCTGTAGGAGAGGGTTTCATGCTGTGGTGATTCGATCGCCACCATTGAATGGGTTAGATGAATCCTTTTGCAGTTGGGGTTTTTTACCGTTAGGGTTTTCAAGTGATTCGAAAGATATTAATGGGTTTGGTTCTAATTGGAACCCATTTTCACCGCCTTTTCCTTGTTCCTCGAAGGGGAATTCCAAGAAGAAAAAGGATTGGGTTTACTATGATGATGAAGCTGCGGCTGCGTTTATCAATATTTCGGACTCTAGCGAGCATGATTCCGATGGGGATTGGAGGGGTGGAAAAAGGAGGATGAGTAAAAGGACAAGGAGTTCCAGGAGGAAATTTACTGATGTTAGGAGGGAACCTGTACAGAGATCTAAAAGGGGCAGTCATGCTGGTGCTGCAGAGAATGAGAATGCGGGTGGCGAGGATGGTGGTAGTGCTGGTGGTGGGGCAGTGGATGGTGTTGCACCTGCAGTACCTGGTGGTACAAATGCAACCTCGGGTGTAAGCACAAGGTCAGAGCCTGGTAAGAGAGGTGCAGTAGGTGGTACTAGGAAAAGGGGTGCAGGAAACTTGGGGAAGTTGGACTTGAATGTGGAGTTCAGTAATGATGCGGAAGAGCGACAAGAGCCTACTCGCGCTGGTGTGCGTGAAGGCCATCCGACTGGCCATGCTGAGGATAATATTGAAGGGATTGGTTTTTTTGAGGGTCTTGATGAGTTCCTCAGTAGCTTGCCCATTCTCAATGTTGTGGGAGATGATAAGGTTAAGGGTCATTAG 1437 0.5226 MEGGGSRAEAERWLYTANKLLSARDFHGARSFAVRARESDPTFDASELLLTVIDTVLAGEIRINDHHCDWYGILQILRYTTNIDHIAAQYRRLALLLDPHHNPFAFSGHAFSLVHDAWSVLSNPVKKSMYDNNLRLLTSQPPPPQQLQPPPPPTQPQPQQKKNPRSKNLSTEPAPSTQTVTEPNESTTTESEEASFWTSCPYCYVMYEYPKVYEECTLRCQSCRRGFHAVVIRSPPLNGLDESFCSWGFLPLGFSSDSKDINGFGSNWNPFSPPFPCSSKGNSKKKKDWVYYDDEAAAAFINISDSSEHDSDGDWRGGKRRMSKRTRSSRRKFTDVRREPVQRSKRGSHAGAAENENAGGEDGGSAGGGAVDGVAPAVPGGTNATSGVSTRSEPGKRGAVGGTRKRGAGNLGKLDLNVEFSNDAEERQEPTRAGVREGHPTGHAEDNIEGIGFFEGLDEFLSSLPILNVVGDDKVKGH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0660 478 MobiDBLite consensus disorder prediction 142 159 - -
Lan6g0660 478 Gene3D DnaJ domain 64 140 IPR036869 -
Lan6g0660 478 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 3 478 - -
Lan6g0660 478 SUPERFAMILY Chaperone J-domain 65 134 IPR036869 -
Lan6g0660 478 MobiDBLite consensus disorder prediction 160 191 - -
Lan6g0660 478 CDD DnaJ 69 123 IPR001623 -
Lan6g0660 478 ProSiteProfiles dnaJ domain profile. 69 134 IPR001623 -
Lan6g0660 478 SMART dnaj_3 68 126 IPR001623 -
Lan6g0660 478 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 478 - -
Lan6g0660 478 Pfam DnaJ domain 69 131 IPR001623 -
Lan6g0660 478 MobiDBLite consensus disorder prediction 419 444 - -
Lan6g0660 478 MobiDBLite consensus disorder prediction 135 191 - -
Lan6g0660 478 MobiDBLite consensus disorder prediction 306 447 - -
Lan6g0660 478 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0660 Lan-Chr6 5881979 5883749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0660 9 477 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 42.213 2.83e-106 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0660 - - gmx:100811866 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0645 17 5591649 5593879 Lan6g0660 6 5881979 5883749 LSH
Lan18g0638 18 11466189 11467917 Lan6g0660 6 5881979 5883749 LSH
Lan6g0660 6 5881979 5883749 Lan4g0734 4 9600782 9602594 PCT
Lan6g0660 6 5881979 5883749 Lan16g0067 16 386485 388441 PCT
Lan4g0734 4 9600782 9602594 Lan6g0660 6 5881979 5883749 PCT
Lan16g0067 16 386485 388441 Lan6g0660 6 5881979 5883749 PCT