Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0628 ATGTCTCGCACGTGCTCACAGTGTGGCAACAACGGCCACAACTCACGCACATGCACCGACGCCACCGCGTCCGGCGGCGGAGAATCTCCTAGAGAGAACAGCATCATGCTGTTCGGCGTTCGAGTTACTGAAGGGAATTCCAATCCGTTCAGGAAGAGTGCTAGCATGGTCAACCTCTCCCAATATGAACACCAAACCCCTAATGAACCCAACGCCGTCGACGCCGGTTATGTCTCAGACGACGTCGTTCACGCCTCTGGCCGTAGCCGCGAGCGCAAAAGAGGTGTTCCATGGACGGAGGAAGAGCATAAACTATTCCTATTGGGGTTGCATAAAGTAGGTAAAGGAGATTGGAGAGGGATTTCTAGAAACTTTGTCAAAACTCGGACACCTACTCAGGTGGCTAGTCATGCTCAGAAGTACTTTCTCCGCCGCCACAACCACACCCGTCGCCGCCGTAGATCTAGCCTCTTTGACATCACCACCGACACGGTGATGGAACCCTCAACCATAATGGAAGAAGAACAAGCATTTCAGCAAGAAATGGTGGTGCCACTTCCACCTATCTCCGCCGGATATCCACCACCTCATTACGGTGGATTCCCTGGCCCGGCTTACCCTATGGCGCTGGCTCCGGTGGTGTTGCCTGTAGTTGCCGGTGGTAGATTAGCCAAGCCTATTAGGCCAACACCGATTTTGCCAGTGCCACCATCTTCGAAGATGGCTAGTTTGAACTTGAAAGAGAATACTTCTCCTCCTCATCTTCCTCTCATCGAGCCTTTACCCTTGTCACTGAAGCTGCCTCTGCCACCATCCAAGGATCAATCATCGGCAAATAGCAGCCACTCATCAACATCGTCCTCATCTGCATCAGCTTTTCAGGCTATGTCTGCAGAGAAGTTCAATAATGGTGGGGATAGCATTATTAGTGTTGCTTGA 939 0.5176 MSRTCSQCGNNGHNSRTCTDATASGGGESPRENSIMLFGVRVTEGNSNPFRKSASMVNLSQYEHQTPNEPNAVDAGYVSDDVVHASGRSRERKRGVPWTEEEHKLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNHTRRRRRSSLFDITTDTVMEPSTIMEEEQAFQQEMVVPLPPISAGYPPPHYGGFPGPAYPMALAPVVLPVVAGGRLAKPIRPTPILPVPPSSKMASLNLKENTSPPHLPLIEPLPLSLKLPLPPSKDQSSANSSHSSTSSSSASAFQAMSAEKFNNGGDSIISVA* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0628 312 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 1 309 - -
Lan6g0628 312 ProSiteProfiles Myb-like domain profile. 90 142 IPR001005 -
Lan6g0628 312 Pfam Myb-like DNA-binding domain 97 142 IPR001005 -
Lan6g0628 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 146 IPR017930 -
Lan6g0628 312 ProSiteProfiles SANT domain profile. 93 146 IPR017884 -
Lan6g0628 312 SUPERFAMILY Homeodomain-like 92 145 IPR009057 -
Lan6g0628 312 ProSiteProfiles Zinc finger CCHC-type profile. 5 20 IPR001878 GO:0003676|GO:0008270
Lan6g0628 312 MobiDBLite consensus disorder prediction 270 293 - -
Lan6g0628 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 93 144 IPR006447 GO:0003677
Lan6g0628 312 SMART sant 94 144 IPR001005 -
Lan6g0628 312 MobiDBLite consensus disorder prediction 1 32 - -
Lan6g0628 312 Gene3D - 96 147 - -
Lan6g0628 312 CDD SANT 97 142 IPR001005 -
Lan6g0628 312 PANTHER TRANSCRIPTION FACTOR KUA1 1 309 - -
Lan6g0628 312 MobiDBLite consensus disorder prediction 266 293 - -
Lan6g0628 312 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0628 Lan-Chr6 5544920 5546491 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan6g0628 Myb_DNA-binding 1.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0628 - - gmx:780554 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0625 17 5349563 5351287 Lan6g0628 6 5544920 5546491 LSH