Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0614 ATGTCCTTATCCTGCCCCGACCGCTTTTCTGACTCTAATCTCCTATGCAGCGAGGACACCTCCGGAGTCATCTCCGGTGAGTCGCCTGAATTCTCATCCTCCAACATCGATTCCTTGCCGCCACCGCTGTCACCGTCATCGGAAGAGGATGAGTCCATCGCTGCGTTCATCGAAGACGAGCGCAACTTCGTTCTCGGACTCGATTACCTTTCAAGGTTCCAATCTCGGTCGCTCGATGATTCCGCGCGCAAAGAATCTGTTGCATGGATTCTCAAGGTGCAGGCTTATTACGGATTTCAACCGCTCACGGCGTATCTTTCCGTCAATTACATGGATCGGTTCTTGAACTCTCGGCAGTTGCCGCAAACAAATGGGTGGCCAATGCAACTTCTGTCTGTTGCATGCTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTGGTTCCGTCTCTGTTGGACCTTCAGGTAGCAGGTCCCAAATACATATTTGAACCCAGAACAATTCAAAGGATGGAATTACTTGTTCTAGGTGTTTTGGATTGGAGGCTGAGATCAATCACCCCATTTAGCTTCCTCAGTTTCTTTGCATGCAAATTAGACTCAAATGGAACTTTTACGGGGTTCCTCGTTTCACGGGCTACACAAATAATCTTGTCTAATGTTCAAGAGGCTAGCTTTCTTGCATACTGGCCATCATGCATTGCTGCCGCGGCCGTACTATTTGCAGCTAACGAAATTCCTGATTGGTCTCTCGTTAAGCCTGAGCATGCCGAGTCATGGTGCGAGGGTTTAAGAAAAGAGAAAATTGTAGGGTGCTACCAATTAATGCAAGAACTTGTTATTATTGACAATAACAAGAAGAAGCTCCCTAAAGTGTTGCCACAGCTGCTATTGACAACTCAGTCCCCAACGAGTTCAAGTATTTCTTTATCCTCATCTTCTTCCTTCTCGTTGTCTTACAAAAGAAGGAGAATAAATAACTGTTTGTGGGTCGATGGTGACACTGAAAACTCCCAGTGA 1017 0.4661 MSLSCPDRFSDSNLLCSEDTSGVISGESPEFSSSNIDSLPPPLSPSSEEDESIAAFIEDERNFVLGLDYLSRFQSRSLDDSARKESVAWILKVQAYYGFQPLTAYLSVNYMDRFLNSRQLPQTNGWPMQLLSVACLSLAAKMEEPLVPSLLDLQVAGPKYIFEPRTIQRMELLVLGVLDWRLRSITPFSFLSFFACKLDSNGTFTGFLVSRATQIILSNVQEASFLAYWPSCIAAAAVLFAANEIPDWSLVKPEHAESWCEGLRKEKIVGCYQLMQELVIIDNNKKKLPKVLPQLLLTTQSPTSSSISLSSSSSFSLSYKRRRINNCLWVDGDTENSQ* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0614 338 MobiDBLite consensus disorder prediction 21 50 - -
Lan6g0614 338 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 326 - -
Lan6g0614 338 Pfam Cyclin, C-terminal domain 185 291 IPR004367 -
Lan6g0614 338 Pfam Cyclin, N-terminal domain 53 182 IPR006671 -
Lan6g0614 338 PANTHER CYCLINS 1 326 IPR039361 -
Lan6g0614 338 SMART cyclin_7 88 176 IPR013763 -
Lan6g0614 338 SMART Cyclin_C_2 185 310 IPR004367 -
Lan6g0614 338 Gene3D - 56 246 - -
Lan6g0614 338 SUPERFAMILY Cyclin-like 42 182 IPR036915 -
Lan6g0614 338 ProSitePatterns Cyclins signature. 83 114 IPR006671 -
Lan6g0614 338 CDD CYCLIN 83 175 IPR013763 -
Lan6g0614 338 MobiDBLite consensus disorder prediction 21 42 - -
Lan6g0614 338 SUPERFAMILY Cyclin-like 167 281 IPR036915 -
Lan6g0614 338 Gene3D - 66 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0614 Lan-Chr6 5378233 5381867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0614 10 338 Core Cell Cycle Gene Families AT1G70210 62.462 3.70e-135 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0614 K18810 - gmx:100775224 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0613 17 5168071 5172920 Lan6g0614 6 5378233 5381867 LSH
Lan18g0669 18 11858006 11862191 Lan6g0614 6 5378233 5381867 LSH
Lan6g0614 6 5378233 5381867 Lan17g1095 17 17878665 17882720 PCT
Lan17g1095 17 17878665 17882720 Lan6g0614 6 5378233 5381867 PCT