Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0605 ATGCCATTTGGTTTAGTCTCAGCCTGGAATAAGCGCCGCAGGAGCAAATCTGAAGATCATACAGACCCATACATTATTTATTCAGGGATTTACAAACCTGCAGAGTTTTGGCAACTCGAAGATCAAACACCACAACCTACAAAAAGACTGCATGGGTCATCTGTTTTCATACTCAAGGAGATGGAAGAGGCAACAGGTTCATTCAGTGAGGAAAATCTGCTTGGAAAAGGAGGATTTGGCAAAGTCTACCGGGGCACTTTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAGATGGAGTTGCCAGCAATTAAATTAGCACAGGGGGAACATGAGTTCCGTGTTGAAGTTGACATCTTGAGCAGACTCCACCACCCAAATCTTGTTTCTCTGATAGGCTACTGTGCTGATGGAAAGCATAGGTTCCTGGTATACAAATATATGCATAATGGGAACCTGCAAGATCATTTAAATGGAATTGGGGAAAGAAAAATGGATTGGCCAGTAAGACTAAAAGTGGCACTAGGAGCTGCAAGAGGACTTCATTATCTTCATTCAAGTTCTGACATTGGAATCCCTATTGTTCATAGAGATTTCAAATCGACCAATATTCTCTTAGATGCCAACTTTGAAGCTAAGATATCGGATTTTGGGCTCGCCAAGTTAATGCCTGAAGGACAAGAAACACATGTGACAGCCAGGGTACTTGGTACCTTTGGCTATTTTGATCCTGAATATACATCGACTGGGAAACTCACTCTACAAAGTGATGTATATGCTTTTGGCGTTGTTCTACTGGAACTTTTGACTGGACGCCGAGCTATAGATCTAAACCAGGGTCCTAACGATCAGAATCTTGTACTACAGGTCAGGAACATACTGAATGACCGCAAGAAGCTCCGAAAAGTGATAGATCCGGACATGGCTCGAAATTCTTACACCATTCAGTCAATAGTCATGTTTGCCAATCTAGCATCAAGATGTGTCCGTGCTGATAGTAGTGAGAGACCTTCAATGGCAGAATGTGTAAAAGAACTCCAACTGATTATCTATACGAATTCAAAAGGCTTGGGAATGGTTATGCATAGTTTGAGAATGATCTAG 1101 0.4214 MPFGLVSAWNKRRRSKSEDHTDPYIIYSGIYKPAEFWQLEDQTPQPTKRLHGSSVFILKEMEEATGSFSEENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKLAQGEHEFRVEVDILSRLHHPNLVSLIGYCADGKHRFLVYKYMHNGNLQDHLNGIGERKMDWPVRLKVALGAARGLHYLHSSSDIGIPIVHRDFKSTNILLDANFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAIDLNQGPNDQNLVLQVRNILNDRKKLRKVIDPDMARNSYTIQSIVMFANLASRCVRADSSERPSMAECVKELQLIIYTNSKGLGMVMHSLRMI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0605 366 PIRSF ILK 35 357 - -
Lan6g0605 366 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0605 366 Gene3D Transferase(Phosphotransferase) domain 1 147 357 - -
Lan6g0605 366 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 366 - -
Lan6g0605 366 SUPERFAMILY Protein kinase-like (PK-like) 44 351 IPR011009 -
Lan6g0605 366 CDD STKc_IRAK 74 348 - -
Lan6g0605 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Lan6g0605 366 PANTHER OS01G0750732 PROTEIN 1 366 - -
Lan6g0605 366 Pfam Protein kinase domain 69 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0605 366 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Lan6g0605 366 Gene3D Phosphorylase Kinase; domain 1 37 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0605 Lan-Chr6 5322750 5326984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0605 51 345 Receptor kinase-like Gene Family AT3G58690 47.333 1.21e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Lan6g0605 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0605 - - aprc:113868910 660.218