Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0597 ATGGGAGGTAGTGATGGGATTGAAGAGATAAGTACGAGGTTGTTGGATAGTTTCAGCAATGATGGAAGCAGTGAGTCAAGGTGGGTTGATGGCAGTGAAGTGGATTCAATGGAGGCTCCTCCATCATGGGCTAATGAAGGTAGAGAGGGACATGGATCACTTAGAAGGAGGTTTGTGAATAAGCCCAACAGGGTTGATTCATTTGATGTTGAAGCCATGAAGATTTCTAGAACTCAGGATCACATCTTGCAGGATGCATCCCTTTTGCCTACTCTTGCATTAGCATTTCAGACTCTTGGTGTGGTATATGGTGACATGGGAACAAATCCTCTATATGTTTTTGCTGATGTCTTCAGCAAGGTTCCAATTGAAACAGAAGTTGATATATTGGGGGCATTATCATTAGTGATTTACACAATAGCAGTTATTCCATTAGCTAAGTATGTTTTTATAGTCCTTAAAGCAAATGACAATGGAGAAGGAGGAACATTTGCACTATACTCCCTGATTTGCAGATATGCAAATGTGGGTCTGCTGCCGAATCGTCAACAAGCTGATGAACATATCTCTAGTTTTAGGCTCAAACTACCCACTCCAGAACTGAAAAGGGCTTTAAAAATAAAGGACAATTTGGAAAAGAAGAAGTCTTTGAAATTCCTTTTGTTGGTGTTGGTTCTTCTGGGAACTTCCATGGTTATTGGAGATGGTATTCTAACCCCAGCAATGTCAGTGTTGTCTGCCATGAGTGGGCTTCAGGGTAAAATAAAAGGTTTTGGTACAGAGGAAGTGGTTATTATTTCAATTGTAGTCGTGGTTGCATTGTTCAGCATACAACAGTTTGGTACCACTAAAGTGGGTTTCCTGTTTGCCCCTATACTTGGTCTATGGTTCTTTTCTCTGGGTTCTATCGGAGTTTATAATGTGGTTAAGTATGATATCACTGTTCTGAGAGCAATCAATCCAGTTTACATTTATTATTTCTTTAAGAAGAATGGGAAACATGCATGGTCAGCTCTTGGTGGTTGTGTTCTGTGTATTACAGGTGCAGAAGCAATGTTTGCTGATCTGGGTCATTTTTCTGTGAAAGCAATACAGATTGCCTTCACTTTTGTGGTATTTCCTTGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTATTTGATGAAGAACCCGGCTTCTTATATAAATATATTCTATGATTCTGTTCCAGGTAGCCTATTCTGGCCAGTGTTTGTGATAGCCACACTTGCTGCTATGATTGCTAGCCAAGCAATGATATCTGCTACTTTTTCATGCATAAAGCAAGCTATGGCTTTGGGATGCTTTCCCAGGATCAAGATAGTTCATACCTCAAGGAAGTTCATGGGTCAAATTTACATCCCAGTAATTAATTGGTTTCTGATGGTCATGTGCATAATTATCATTGCCATCTTCCAACGCTCTACCAATATTGCAAATGCATATGGCATTGCTGAAGTTGCTGTTATGATGGTTAGCACATCCTTGGTAACACTTGTAATGCTTTTAATTTGGCAGACCAACTTGTTTTTGGCATTCTGTTTCCTACTCGCATTCGGATCAGTTGAGCTCATTTACATGTCTTCTGTACTCTCAAAAATCGCCGAGGGTGGCTGGCTTCCACTTGCCTTCGCTGTCTTCTTCCTTGCTGTGATGTACACATGGAACTACGGGAGTGTATTAAAATACCGAAGCGAAGTTAGGGAGAAGATTCCGTCCAACTTAATGCTTGATCTTGGCTCCAATCTTGGAACAGTAAGAGTGCCAGGAATAGGATTGGTATATAATGAGCTTGTCCAAGGCATTCCCTCAATTTTTGTGCAGTTCTTGCTGTGCCTTCCAGCTCTTCACTCTACTATAATTTTTGTCTGCATTAAATATGTCCCTATCCCGGTGGTTCCTCAAGAGGAAAGGTTTCTATTTCGAAGAGTTTGCCCGAAAGATTATCATATGTTTCGCTGTGTTGCGAGGTATGGTTACAAAGATGTAAGGAAGGAAGATCACCATGCATTTGAGCAGCTTCTTATCAAAAGTCTGGACAATTTCTTGCGAAGGGAGGCTCGAGAATCTGTCTTGGAGAGCAATGTGATTGAAGACATAGACAATGTCTCAGTGAAATCCAAGGATTGTGATCTTCCTTCTAATAGTGTGAATGAAGAGCTTAGGATTCCATTAATGCTTGGTGGAAATTCCGAAGAATCCGGAACTTCTACCTCTCTGGAACATTCAGCAGCATTACCATCAACTTATATGTCATCAGATGAAGACCCTAGCCTTGAATATGAGCTTTCAGCCCTTAGAGAAGCAACAGCATCAGGATTTACCTATTTGCTTGGGCATGGTGATGTGAGGGCAAAGAAAAACTCATTTTTCATTAAGAAATTGGTGATAAATTATTTCTACGCATTTCTAAGAAAGAACTGCAGAGGAGGTACTGCAAACATGAGAGTACCTCACACCAATATCATTCAAGTTGGGATGACATATATGGTCTAA 2514 0.4065 MGGSDGIEEISTRLLDSFSNDGSSESRWVDGSEVDSMEAPPSWANEGREGHGSLRRRFVNKPNRVDSFDVEAMKISRTQDHILQDASLLPTLALAFQTLGVVYGDMGTNPLYVFADVFSKVPIETEVDILGALSLVIYTIAVIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVGLLPNRQQADEHISSFRLKLPTPELKRALKIKDNLEKKKSLKFLLLVLVLLGTSMVIGDGILTPAMSVLSAMSGLQGKIKGFGTEEVVIISIVVVVALFSIQQFGTTKVGFLFAPILGLWFFSLGSIGVYNVVKYDITVLRAINPVYIYYFFKKNGKHAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTFVVFPCLLLAYMGQAAYLMKNPASYINIFYDSVPGSLFWPVFVIATLAAMIASQAMISATFSCIKQAMALGCFPRIKIVHTSRKFMGQIYIPVINWFLMVMCIIIIAIFQRSTNIANAYGIAEVAVMMVSTSLVTLVMLLIWQTNLFLAFCFLLAFGSVELIYMSSVLSKIAEGGWLPLAFAVFFLAVMYTWNYGSVLKYRSEVREKIPSNLMLDLGSNLGTVRVPGIGLVYNELVQGIPSIFVQFLLCLPALHSTIIFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIKSLDNFLRREARESVLESNVIEDIDNVSVKSKDCDLPSNSVNEELRIPLMLGGNSEESGTSTSLEHSAALPSTYMSSDEDPSLEYELSALREATASGFTYLLGHGDVRAKKNSFFIKKLVINYFYAFLRKNCRGGTANMRVPHTNIIQVGMTYMV* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0597 837 PANTHER POTASSIUM TRANSPORTER 12-RELATED 20 837 - -
Lan6g0597 837 TIGRFAM kup: potassium uptake protein 94 837 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan6g0597 837 MobiDBLite consensus disorder prediction 14 30 - -
Lan6g0597 837 Pfam K+ potassium transporter 95 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan6g0597 837 MobiDBLite consensus disorder prediction 14 50 - -
Lan6g0597 837 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 837 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0597 Lan-Chr6 5231769 5237853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0597 5 837 Inorganic Solute Cotransporters AT1G60160 72.368 0.0 1214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0597 K03549 - gmx:100814419 1276.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0604 17 5070752 5076651 Lan6g0597 6 5231769 5237853 LSH
Lan18g0680 18 12034561 12040779 Lan6g0597 6 5231769 5237853 LSH