Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0592 ATGAATCAACAACTCAACCATGTGAAACTCCTCTGTCTCCTTATCCTCGTCTCATCTCTCACTATCGGTTTTGCCACGGTGGCCGGAGATGACAAAAATCCCTTCACCCCAAAGGCTTATCTCATTCGCTACTGGGACAAGGAGATCCGCAACAACCTTCCAAAGCCACCATTCCTTTTATCCAAAGCCTCACCGCTGAACGCCGTAGATGCGGCGGCGTTTGCGAAACTCGCTGCTGCAGATGGCGGCGCTGCTCTTTCCACGCGCCTCCCTGAATTTTGCACTGCAGCGAAACTCCTTTGCTTCCCTGAATTGCAACCGAGTTTGGAAAAGCATGACAAAGATTCAAACTTTGCAGTGTACCAAGACAAGAACTTCACCAATTACGGAACGGGTCGACCCGGTGGACTCGACTCGTTCAAGAAATACTCAGAAGGAGTGAATATTCCGGTGAACGATTTCCGCCGATACAGCCGCAACTCCGCCGGCCATAAAGACAGTTTCCTCAGTTACGCCGACGACGGTAACGTCGTGGAACAGACCTTCCACACTTACGGCGCCGGAGCCACCGGAGGATCCGGCGATTTCAAAGTCTACGCCGACGAAAACAACGTCCCTGATATCCGTTTCACAACCTACTCCTCCGACACAAACGGAAGAACACAATCCTTCACTTCATACTCCGAAAACGGCAATGCCGGAGAACAAACATTCACAGCATATGGCAAAAACGGTAATGGCGCTGAGAACCAGTTTTCCTCGTACGGAAAAAGCTCCAACGTTGTCAGTTCCGGTTTTTCCAATTACGCTGAAACCGCAAATGGCGCCAATGACAGTTTCACAAGTTATAGTACTGACATGAACAACCCCACTAACGATTTCAATAACTATGCTGATGGTGGCAATGGTGTTACCGAAACTTTCTCTAGTTACCGTGACCAAGCCAATGTTGGTGCTGACTCTTTCAGTTCTTATGCTAAAAATTCCAATGCTGCTGAAGTTGATTTCAGCAACTATGGCAAAACATTCAATGAAGGAATAGACAGATTCACAGGTTATGGAAAAGGTGCAACCGGTGAAAGTAAGGTTGGATTTACAACCTACGGTGTTAACAACACGTTTAAAGAGTATAACAAGGAAGATGTTTCTGTTTCTTTTTCAAGGTATACTAATGTGAGTTCTGGTGGTTCAGTGTCTCAAAGTGTTTCAAGAGTGAGTGATAATTTGGTAAAAAAGTGGGTTGAGCCAGGCAAATTCTTCAGAGAGAAGATGATGAAGGAAGGGACTGTGATGCCTATGCCTGATATTAGAGATAAGATGCCACAAAGGTCGTTTTTGCCTCGGAGCATTTTGTCCAAATTACCCTTCTCATCATCCAAGATTTCGGAGTTGAAGAAGATCTTCAAGGCTTCTGATAATAGTTCAATGGAGAAAATGATGAAGGACTCTTTGGCTGAGTGTGAGAGAGTCCCAAGCCCTGGTGAGACAAAACGGTGCATTGGGTCAATGGAGGACATGATTGATTTTGCAACTTCGGTTTTGGGTCGAAATGTGGTGCCTCGGACTACCCAGAATGTTAATGGGTCCAAGAAGAAAGTGATTGTGAGTAATGTTAAAGGGATCAATGGTGGAAAAGTCACACAATCTGTGTCTTGTCACCAAAGTTTGTTTCCTTATTTGCTCTACTACTGCCACTCTGTGCCTAAGGTTCGGGTTTATGAAGCGGATCTACTTGACCCGAGTACCAAATCCAAAATTAACCATGGTGTTGCAATTTGTCATTTGGATACCTCTGTATGGAGCCCCACCCATGGTGCATTCATGGCTCTCGGCTCGGCTCCCGGTCGGATTGAAGTTTGTCACTGGATCTTTGAGAATGACTTGACTTGGACCACTGCTGATTGA 1905 0.4593 MNQQLNHVKLLCLLILVSSLTIGFATVAGDDKNPFTPKAYLIRYWDKEIRNNLPKPPFLLSKASPLNAVDAAAFAKLAAADGGAALSTRLPEFCTAAKLLCFPELQPSLEKHDKDSNFAVYQDKNFTNYGTGRPGGLDSFKKYSEGVNIPVNDFRRYSRNSAGHKDSFLSYADDGNVVEQTFHTYGAGATGGSGDFKVYADENNVPDIRFTTYSSDTNGRTQSFTSYSENGNAGEQTFTAYGKNGNGAENQFSSYGKSSNVVSSGFSNYAETANGANDSFTSYSTDMNNPTNDFNNYADGGNGVTETFSSYRDQANVGADSFSSYAKNSNAAEVDFSNYGKTFNEGIDRFTGYGKGATGESKVGFTTYGVNNTFKEYNKEDVSVSFSRYTNVSSGGSVSQSVSRVSDNLVKKWVEPGKFFREKMMKEGTVMPMPDIRDKMPQRSFLPRSILSKLPFSSSKISELKKIFKASDNSSMEKMMKDSLAECERVPSPGETKRCIGSMEDMIDFATSVLGRNVVPRTTQNVNGSKKKVIVSNVKGINGGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPSTKSKINHGVAICHLDTSVWSPTHGAFMALGSAPGRIEVCHWIFENDLTWTTAD* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0592 634 ProSiteProfiles BURP domain profile. 419 633 IPR004873 -
Lan6g0592 634 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 11 634 - -
Lan6g0592 634 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 11 634 - -
Lan6g0592 634 SMART BURP_2 417 633 IPR004873 -
Lan6g0592 634 Pfam BURP domain 419 631 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0592 Lan-Chr6 5194304 5197317 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0592 - - gmx:100776642 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0683 18 12084946 12087523 Lan6g0592 6 5194304 5197317 LSH
Lan6g0592 6 5194304 5197317 Lan18g0534 18 10170720 10171511 PCT
Lan18g0534 18 10170720 10171511 Lan6g0592 6 5194304 5197317 PCT