Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0563 ATGGTTGGTTCCTCACAGCCCTCTCCCAAATCCACCATCAAATTCCTCTGCAGCTACGGTGGCAGGATCCTACCCCGCTATCCCGACGGCAAGCTCCGATATTTCGGCGGCCACACCCGCGTCCTTGCCGTTGATCGCACCATTTCATTTTCCGAGTTGTTACTGAAGTTGCAAGAACTGTGTGGAACCTCCGTGAGGCACCTTCGCTGCCAGTTACCCACCGAAGATCTCGACGCTTTGGTATCCATAACCTCCGATGAGGATCTCGCAAACCTCATCGAGGAATACGATCACGCGGCGTCGCCGTCAGCGTCGATGAAGATCAAAGTCTTCCTATCACCGCCAAGATCTATTAACAAGGTTTCCGTACCTCCGTCGCCGTCGCTGTCAAAATCAACGTCTTCCACATCCTCTACCTCCTCATCCTCCTCCTCCTCGTCATCATATCACAGCGCTACCGGTGGTAGTTCTGGTTTTAATTCTGTCCGGAGTTTGAAGTCAGCGGCACCGGTGATCAATCGCTGCGTCCATCAGATATCACCTGCGACCTACTCAGTTATGGTGGAGAGGAAAACTGGCAGTGTTAGTGGGAGGAATGTTCCTCTTCCCCGTTACGGTTACCAAAATCAGGGTCAAGGGAAGACTTGCCACGCTGGCCATGTTCATCTAGTTCACAACGGCAGCAATCATTGGCAATAG 699 0.525 MVGSSQPSPKSTIKFLCSYGGRILPRYPDGKLRYFGGHTRVLAVDRTISFSELLLKLQELCGTSVRHLRCQLPTEDLDALVSITSDEDLANLIEEYDHAASPSASMKIKVFLSPPRSINKVSVPPSPSLSKSTSSTSSTSSSSSSSSSYHSATGGSSGFNSVRSLKSAAPVINRCVHQISPATYSVMVERKTGSVSGRNVPLPRYGYQNQGQGKTCHAGHVHLVHNGSNHWQ* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0563 232 SUPERFAMILY CAD & PB1 domains 29 121 - -
Lan6g0563 232 CDD PB1_UP2 16 112 - -
Lan6g0563 232 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 5 231 - -
Lan6g0563 232 MobiDBLite consensus disorder prediction 122 153 - -
Lan6g0563 232 Pfam PB1 domain 29 112 IPR000270 GO:0005515
Lan6g0563 232 Gene3D - 32 113 - -
Lan6g0563 232 SMART PB1_new 27 113 IPR000270 GO:0005515
Lan6g0563 232 MobiDBLite consensus disorder prediction 121 153 - -
Lan6g0563 232 PANTHER OS05G0427100 PROTEIN-RELATED 5 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0563 Lan-Chr6 4952634 4954369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0563 11 114 MAP Kinase Kinase Kinase AT1G04700 49.038 4.78e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0563 - - lang:109349167 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0716 18 12427035 12428851 Lan6g0563 6 4952634 4954369 LSH