Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0548 ATGGACACACCCAAGGCATCCGGATCCGAACCCCAACACTTCATCACTGCATGCACCACCATGCTCTCCTACCGCCGCTTCTCCACCTGCCACGACTTCGCCTCCCATCTCCCAAGGCTTGACCCCAACACCTCCGCCTCCCTCGACAAAATCCTCGCCATCGCCGACGTCCTCTCCGCCGTCCAGACCCGCCTCCCCAACAACCTCCCCGACCACTACTCCATCCTCCTCCTCCGCCGCGAAGACGCTGCCCGCGACCGCGACCTCGTCACCCGCCAGTTCAAGAAGCTCGCCCTCCTTCTTGACCCCACCGCCGCAATTAAATTCCCTTTCTCCGACGAAGCCCTCACGTGCGTCCGAGATTCCTGGCACGTGCTGTCTGACCCAAAAAGTCGCGATCTTTACCACTCTCAAATTGGATACCAGCCACCCAGTGCAACATTCTGGACCGCGTGCCCTTACTGTTGGAACCTTTTTGAGTACGAGACCAAGTACGAGGATTGCCCTTTATTGTGCCAGAGTTGTGGAAAAGCGTTTCACGGTGTGCCGGTTACGGCTCCGGTGAAGGGTGGTGATCACAACAAGGAGTACTATTGGTGTCAAGCAAGTGTGCCCTTGAGGTATAGACAGAAGGAAGATAACAACAACATGAGTGAGAAAATCACCCATTTTGATGAAACCAAATTTGTGTACATTTCTGATGATGATGATGATAATGATGGAGGACGAGGTGAAGGGTTCGGGAAGAATGTGGAGAAAGAGGTTTGGGGTGATGTGAGGAATCAAGGGTTTCAGTTTAAGGGGAATGCTGCACATGGATCAGTGGAATTGCAAGGGGATAATGGGAAGAGGAAGATGAGGATGAAGACTGTGGCAAGGAAGGGTTTTCGGAACAGGATGAGGAACAGACAAGGAGGTTTTGGTATTGATAATAATTTGGATTTGGATGAGGGTGAAGATGGTAACTTGGAGTTCACTGAAGGAGATGGAGATGTCTTCATTGGCGTAAGGTTTGATGAGTGA 1023 0.5191 MDTPKASGSEPQHFITACTTMLSYRRFSTCHDFASHLPRLDPNTSASLDKILAIADVLSAVQTRLPNNLPDHYSILLLRREDAARDRDLVTRQFKKLALLLDPTAAIKFPFSDEALTCVRDSWHVLSDPKSRDLYHSQIGYQPPSATFWTACPYCWNLFEYETKYEDCPLLCQSCGKAFHGVPVTAPVKGGDHNKEYYWCQASVPLRYRQKEDNNNMSEKITHFDETKFVYISDDDDDNDGGRGEGFGKNVEKEVWGDVRNQGFQFKGNAAHGSVELQGDNGKRKMRMKTVARKGFRNRMRNRQGGFGIDNNLDLDEGEDGNLEFTEGDGDVFIGVRFDE* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0548 340 Gene3D DnaJ domain 55 144 IPR036869 -
Lan6g0548 340 SUPERFAMILY Chaperone J-domain 63 138 IPR036869 -
Lan6g0548 340 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 7 339 - -
Lan6g0548 340 Pfam DnaJ domain 71 135 IPR001623 -
Lan6g0548 340 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0548 Lan-Chr6 4795182 4796204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0548 10 208 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 34.979 1.81e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0548 - - lang:109350398 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0571 17 4696257 4697586 Lan6g0548 6 4795182 4796204 LSH
Lan18g0729 18 12632777 12634893 Lan6g0548 6 4795182 4796204 LSH
Lan6g0548 6 4795182 4796204 Lan17g1196 17 20269144 20270356 PCT
Lan17g1196 17 20269144 20270356 Lan6g0548 6 4795182 4796204 PCT