Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0535 ATGGCATTGAATGAAAATCATAAAAATGAGAACTTTTCAAGCGACGACGATTCATCTCCAAGAGGGGTATTGGAAACCCCTGTTTCAGGAACAGAGTCAGATATCAGTGGAAACAGCAGCAGCAGTGGCCATTCCATTTCGCCGTTAAGTTCACCGTCGTCGGCGGCGGCGGAGGCACAGAGAGTGGGTGGATTTGATGGGTACATGCCGCAATGGAAGACAATGTTTGACGTTTTGACGTTTAAGTCAGTTAGAAAATTAACGGTGTTTCCTATGCTTTCTGCGAACCATGATGTTTCAAAGAAAGGGTCGACAAAGAAATTGGCTCGTATTAGAAGCGCGGAAGATACAATTGATATTGGAGCTGTTCCTATGAAACCATCTTGGAGGAACTTTGATTATGCAGAGCTTGCAGCTGCAACTGATGATTTCAGTTCCGAAAACATGATTGGGAAAGGTGGTCATGCTGAAGTGTTCAGAGGGTACCTCCCAGATGGTCAAGTTATAGCAGTAAAGAGACTAATGAAGAATGAAAAGGATCCTGGGGATAGAGCATGTGATTTCTTAACAGAGCTTGGGATTATTGCACACATAAACCACCACAACGCAACACACCTTGTTGGGTTTGGTATCGAGCGTGGCCTCTACTTTGTTCTACAATTTGCTGAACATGGCAGCCTTTCTTCTATGCTTTTTGGTTCTGAATTCTTTGAGTGGAAGAAAAGGTTCAATGTAGCTGTTGGGGTAGCAGAAGGGTTATTGTATCTCCATCAAGATTGCCCAAGAAGAATCATTCATAGAGACATTAAAGCCTCAAACATATTACTCAATGACAATTATGAAGCTGAGATTTCAGATTTTGGACTAGCAAAGTGGCTCCCTGGTAAGTGGTCCCATCACGTTGTCTTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTACTTCATGCACGGAGTTGTGGATGAGAAGACTGATGTATTCGCGTTTGGGGTTTTGCTGTTGGAGCTTATAACAGGTCGTCGTGCAGTTGATTCTGATAGTAGGCAAAGTCTTGTGGTCTGGGCTAAGCCGCTTCTGGAGACAAAAAATGTCAAAGAAATAGCAGACCCCAGATTAGGAGAGGAATATGATCCTACTGAAATGAACCTTGTCATGGTGGCAGCTTCCATGTGTGTCCACCATTTATCGTCCATGCGACCATACATGGATCACGTTGTGAAGCTGTTGAAGGGTGAAGCAGTTATAGAACTCAAACAGAGTCCAGGTTCATCAAAATCACTATTGTTAGAGGCCTGTGACCTAGAAGATTATACTTGTTCTAATTACTTGAAGGACCTAAACCGCCACAAACAATTACTCATGGAGTGA 1374 0.4345 MALNENHKNENFSSDDDSSPRGVLETPVSGTESDISGNSSSSGHSISPLSSPSSAAAEAQRVGGFDGYMPQWKTMFDVLTFKSVRKLTVFPMLSANHDVSKKGSTKKLARIRSAEDTIDIGAVPMKPSWRNFDYAELAAATDDFSSENMIGKGGHAEVFRGYLPDGQVIAVKRLMKNEKDPGDRACDFLTELGIIAHINHHNATHLVGFGIERGLYFVLQFAEHGSLSSMLFGSEFFEWKKRFNVAVGVAEGLLYLHQDCPRRIIHRDIKASNILLNDNYEAEISDFGLAKWLPGKWSHHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAFGVLLLELITGRRAVDSDSRQSLVVWAKPLLETKNVKEIADPRLGEEYDPTEMNLVMVAASMCVHHLSSMRPYMDHVVKLLKGEAVIELKQSPGSSKSLLLEACDLEDYTCSNYLKDLNRHKQLLME* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0535 457 MobiDBLite consensus disorder prediction 16 55 - -
Lan6g0535 457 Gene3D Phosphorylase Kinase; domain 1 104 219 - -
Lan6g0535 457 SUPERFAMILY Protein kinase-like (PK-like) 127 423 IPR011009 -
Lan6g0535 457 ProSitePatterns Protein kinases ATP-binding region signature. 150 172 IPR017441 GO:0005524
Lan6g0535 457 Pfam Protein kinase domain 145 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0535 457 MobiDBLite consensus disorder prediction 1 55 - -
Lan6g0535 457 Gene3D Transferase(Phosphotransferase) domain 1 223 423 - -
Lan6g0535 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Lan6g0535 457 PANTHER OS08G0249100 PROTEIN 4 457 - -
Lan6g0535 457 ProSiteProfiles Protein kinase domain profile. 144 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0535 457 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 4 457 - -
Lan6g0535 457 SMART serkin_6 144 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0535 Lan-Chr6 4673240 4679484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0535 132 407 Trihelix Transcription Factor Family AT1G68690 45.804 8.90e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan6g0535 Pkinase 1.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0535 - - gmx:100818314 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0735 18 12707961 12712991 Lan6g0535 6 4673240 4679484 LSH