Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0530 ATGGAAGACTCCAATGATTCCTTGCTGGATTCTATGGTTTGCGACTCAAGTTCAAGATTGATCCCATCTGGGTTTACAAGACCTGATAACTCGGATGGAGAGTATTTCATGTTTGTGAATGCGGGTGGTGAAGCTTTTAATGAAGCAGATGGTGAAATAACTTTCCTGGGTGACACCTGTTTTGATGGTGGGAATGTTTTTCGTACCGATGAACAGATAGTGGGTGCTGGAGATTACCTGTTTATGTATCAATCAGCTCGGTTAGGAAATTTTTGTTATAGGTTTGAAAATATTCCTCCCGGAAACTATGTTATTGATCTTCATTTTGTAGAGATCATTAACACAAATGGGCCAAAAGGAATGAGGGTATTCAATGTATACATCCAAGAAGAAAAGGTTCTGTCTGAATTAGATACCTTTGCGGTTGTTGGAGCCAATAAACCAGTACAGTTTATCGATTCAAGGGTGCATGTGAAGGATGATGGAGTAATACTCATAAGATTTGAAAGTATAAATGGAAGCCCACTGGTCAGTGGGATTTGCGTAACGAAAACAACAAAGGTGTCAGTTCCACAAGTTACAAGTGATTACATTAAATGTAACTACTGTGCAACGGAGATTGAAATTCCTTCATCACAGACAAAATATACTTCAAAATATGAGAACAAGATTAGAGAGCTTACTATGCAATGTGAGCTAAAAGCAAAAGAATGCTATGAGGCATGGATGTCATTAACTACAACGAATGAGCAATTGGAAGCAACCCAAATGGAATTAGACAAAGTAACATTTAAGTTGCTCACTATTGATCAAACTTTGGAGAAACAAGCCGAAGACCTGAGGAGTATTTCTAGCAGGTATGAACTTGACAAGAAAAAATGGGCAGAAGCAATTAGCAGTTTGCAGGAAAAAGTAAAGTTGATGAAAAGTGACTATTGTCAACTTTCCTTTGAAGCGCATGAATGTGTTGATTCAATTCCTGAATTAAATAAGATGGTTTTTGCAGTTCAGGGGTTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTTTTCTGCCGTTGTCGTCCATTGAATAAGGTTGAAATATCAGCTGGTTGTTCAACAGTAGTGGATTTTGATGCAGCACAGGATGGATGCCTAGGAATTTTGACAAGTGGCTCCACTAAAAAATCATTCAGATTTGACAGAGTTTGTACACCAAAAGATGATCAAGTTGATATTTTTGCTGATGTGTCATCAATGGCAATCTCTGTGTTAGATGGCTACAATTGTTGCATCTTTGCCTACGGGCAAACAGGATCAGGAAAGACATTTACCATGGAGGGCATAGAACATAATAGAGGAGTAAATTACAGGACTCTTGAGCTCTTGTTTAAAATTAGCAAGGAAAGGAGTGAAACATTTGCATATGACATATCTGTTAGTGTGCTTGAGGTTTATAATGAACAAATCAGAGACCTATTGGCTACAGGACCAACATCAAAAAGATTGGAGATAAAACAAGCCTCTGAAGGATCTCATCCTGTTCCTGGTGTTATAGACGCCAAGGTTGATAACATTAGTGAAGTGTGGAATGTACTGCAGGCTGGAAGTAATGCTAGAGCAGTTAGAAGTAATAACATCAATGAGCATAGCAGTCGATCTCACTGCATACTTTGTATAATGGTAAGGGCTAAGAATTTGATGAGTGGCGAGTGTACCAAGAGCAAACTTTGGCTTGTAGATTTGGCAGGTAGTGAGAAACTTGCAAGGACGGATGTACAAGGGGAGCGGCTTAAGGAAGCACAAAATATCAACAGATCTCTTTCAGCCCTTGGGGATGTGATATCAGCTTTAGCAGCCAAAAGTAGCCACATTCCATATAGGAACTCGAAATTGACACATTTACTTCAAGACTCATTGGTAGGTGACTCCAAAACTTTGATGTTTGTACAAATCAGCCCGTTGGAACAGGACGTAAGTGAGACCCTGAGCTCACTTAACTTTGCAACAAGAGTGAGGGGCATTGAGTTAGGTCCTGTTAAGAAGCAAATCAACACAGGTGAACTTCAAAAGGTGAAAGCAATGCTTGAAAAAGCATGGAGCGAGTGCAGAATTAAAGATGAATCCATACGGAAGCTAGAAGAAAATTTGAAAAGTGTGGAGAGTAAGGCTAAAGGCAAGGATAATATTCATAAAAATGTACACGAAATGATTAACGAACTTGAAGGCCAGATTGAGTTGAAGACAGCCATGCAGAATCAGTCAGAGAAACAAATTTCCCAATTATCAGACAAATTGAAAGTAAAAGAAGAAACCTGTAGTACTCTCCAACAAAAGGTGAAAGATCTAGAGAAAAGTCTGAATGAACAATTGCAGTCAGAGACAGCAAATTATCAGCAGAAGGTGTTGAAGCTGGAAAAGAAGCTGAAAGATCAGTTGCAAGGTTCGGAGTCTCAGCCTGCCATTCTAAAACAAAAGGTGAAAGAGCTTGAGAGAAAACTGAAGGAGCAGGATCAGAGTTCCGAGTTGTTCTTCTATCGTCAGCAGGTGAAGGAGCTTGAGAGAAAACTGAAGGAGCAAGATCAGAGTTCAGAAATGTCCTTCTATCGTGAACAGGTCAAGGATCTTGAGAAAAAACTGAAGGAGCAGGAACAGAGCTCAGAGTTGTCCTTGCTTCGTCAACGGGTGAAGGAACTAGAGGACAGGTGCAGAGAGCAACAAAGTCATGGTTTTGTTGAAGCAGCAAAGGCCACACCTGACATAGGCAAAGGCTGCAAAACAAGTGAGAAATGTCTAAGTGAGATTGAACCTCATATTTTGAAGAGTTCAAACTCATCAAACTGCCACATAAATCAAGATTCTACTCATCAGATAAGAATCAAAAGAGATTTGAGAAGCAATGAAATAGAGAACAATTATGTCATGTCATCATCCCCTTTACACAAAAGAAAAGTCACAAGGAAATCTGGTCCACCTATGGTAGGTAGAGGTGTGAAGCCAACAACAAAGTCAGTCATTACTACTCAACCTTCATTATCTCACAAGAGAGCTAGCACTAGCAGAGATATTCAAGGAATTGAAGAGAGGGATAGTAAGAATTTTTTTTGGAACAGATAG 3168 0.3952 MEDSNDSLLDSMVCDSSSRLIPSGFTRPDNSDGEYFMFVNAGGEAFNEADGEITFLGDTCFDGGNVFRTDEQIVGAGDYLFMYQSARLGNFCYRFENIPPGNYVIDLHFVEIINTNGPKGMRVFNVYIQEEKVLSELDTFAVVGANKPVQFIDSRVHVKDDGVILIRFESINGSPLVSGICVTKTTKVSVPQVTSDYIKCNYCATEIEIPSSQTKYTSKYENKIRELTMQCELKAKECYEAWMSLTTTNEQLEATQMELDKVTFKLLTIDQTLEKQAEDLRSISSRYELDKKKWAEAISSLQEKVKLMKSDYCQLSFEAHECVDSIPELNKMVFAVQGLVKQCEDLKVKYNEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEISAGCSTVVDFDAAQDGCLGILTSGSTKKSFRFDRVCTPKDDQVDIFADVSSMAISVLDGYNCCIFAYGQTGSGKTFTMEGIEHNRGVNYRTLELLFKISKERSETFAYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQASEGSHPVPGVIDAKVDNISEVWNVLQAGSNARAVRSNNINEHSSRSHCILCIMVRAKNLMSGECTKSKLWLVDLAGSEKLARTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLVGDSKTLMFVQISPLEQDVSETLSSLNFATRVRGIELGPVKKQINTGELQKVKAMLEKAWSECRIKDESIRKLEENLKSVESKAKGKDNIHKNVHEMINELEGQIELKTAMQNQSEKQISQLSDKLKVKEETCSTLQQKVKDLEKSLNEQLQSETANYQQKVLKLEKKLKDQLQGSESQPAILKQKVKELERKLKEQDQSSELFFYRQQVKELERKLKEQDQSSEMSFYREQVKDLEKKLKEQEQSSELSLLRQRVKELEDRCREQQSHGFVEAAKATPDIGKGCKTSEKCLSEIEPHILKSSNSSNCHINQDSTHQIRIKRDLRSNEIENNYVMSSSPLHKRKVTRKSGPPMVGRGVKPTTKSVITTQPSLSHKRASTSRDIQGIEERDSKNFFWNR* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0530 1055 Coils Coil 720 747 - -
Lan6g0530 1055 Coils Coil 860 926 - -
Lan6g0530 1055 Gene3D - 32 188 - -
Lan6g0530 1055 Gene3D Kinesin motor domain 317 694 IPR036961 -
Lan6g0530 1055 SMART kinesin_4 368 700 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan6g0530 1055 PANTHER KINESIN-LIKE PROTEIN KLP-3 890 1037 - -
Lan6g0530 1055 PANTHER KINESIN-LIKE PROTEIN KLP-3 5 883 - -
Lan6g0530 1055 MobiDBLite consensus disorder prediction 999 1040 - -
Lan6g0530 1055 PRINTS Kinesin heavy chain signature 444 465 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan6g0530 1055 PRINTS Kinesin heavy chain signature 562 579 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan6g0530 1055 PRINTS Kinesin heavy chain signature 593 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan6g0530 1055 PRINTS Kinesin heavy chain signature 642 663 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan6g0530 1055 ProSiteProfiles Kinesin motor domain profile. 370 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan6g0530 1055 PANTHER KINESIN-LIKE PROTEIN KIN-14R 890 1037 - -
Lan6g0530 1055 PANTHER KINESIN-LIKE PROTEIN KIN-14R 5 883 - -
Lan6g0530 1055 Pfam Kinesin motor domain 376 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan6g0530 1055 MobiDBLite consensus disorder prediction 1018 1036 - -
Lan6g0530 1055 CDD KISc_C_terminal 368 694 - -
Lan6g0530 1055 Pfam Malectin domain 37 180 IPR021720 -
Lan6g0530 1055 Coils Coil 755 825 - -
Lan6g0530 1055 Coils Coil 343 370 - -
Lan6g0530 1055 ProSitePatterns Kinesin motor domain signature. 592 603 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan6g0530 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 329 692 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0530 Lan-Chr6 4602998 4609554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0530 318 719 Calmodulin-binding Proteins AT5G65930 41.565 6.61e-83 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0530 K10406 - gmx:100800016 1513.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0558 17 4561112 4567767 Lan6g0530 6 4602998 4609554 LSH
Lan18g0739 18 12758919 12765480 Lan6g0530 6 4602998 4609554 LSH