Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0527 ATGGCAACAGAGGCTGAATTAGAGCATCCCAGGAAGGCATTTGGATGGGCAGCAAGGAATGCTTCTGGTCTTCTCTCCCCTTTCAATTTCTCCAGAAGGGAAACAGGTGAGAAAGATGTGCGATTGAAAGTGTTGTACAGTGGAGTATGTCACTCGGACCTCCACATGATTAAGAATGAATGGGGCGAAACTACCTTTCCCATAGTACCTGGGCATGAGATAACTGGTATAGTGACAGAGGTGGGAAGCAAGGTACAAAAGTTCAAAGTTGGCGACAATGTGGGTGTGGGATCCTTGGTTGGTTCCTGCCACTCATGTCAAGATTGTATTGACAATCTTGAGAATTATTGTCCAAATCCTATTCTCACATATGGTGTTGAGGATATTGATGGCACCATGACATATGGAGGCTACTCTGACTCAATGGTTGCGGACGAGCACTTTGTGATCAACATTCCTGATACATTGCCTCTTGATGTTGCTGCTCCACTCCTTTGTGCTGGAATCACAGTGTATAGTCCTCTTCTATATTTTGGACTTGACAAGCCTGGCTTAAATATTGGTGTGGTTGGCCTTGGTGGGCTAGGTCATATGGCTGTGAAGTTTGCCAAAGCTTTTGGTGCTAATGTGACAGTAATTAGTACATCGCCTAATAAAAAAGAGGAAGCAATACAACATCTTGGAGTTGATTCATTTCTGATAAGCAGTGATCATGACCAGATGAATGCTGCAATTGGAACTTTGGATGGTATTATTGACACCGTTTCTGCATTTCATCCCCTCTCACCATTGATTGGTTTGTTAAAGTCTCATGGAAAGCTTGTAATGCTTGGTGCACCAGTGAAGCCTCTAGAGTTGCCAGTATTTCCTTTACTTTTGGGGAGAAAGATAGTAGCTGGAAGTCATATGGGAGGGTTAAAGGAAACACAAGAAATGATTGATTTTGCTGCTAAACACAATGTCAAACCTGAAGTTGAGGTTATTCCTATTGATTATGTGAACACAGCTATGGAGCGTCTCGTTAAAGCAGATGTGAAATATCGATTTGTGATTGACATTGGAAATACATTGAAGGCAAACTTTTGA 1086 0.4227 MATEAELEHPRKAFGWAARNASGLLSPFNFSRRETGEKDVRLKVLYSGVCHSDLHMIKNEWGETTFPIVPGHEITGIVTEVGSKVQKFKVGDNVGVGSLVGSCHSCQDCIDNLENYCPNPILTYGVEDIDGTMTYGGYSDSMVADEHFVINIPDTLPLDVAAPLLCAGITVYSPLLYFGLDKPGLNIGVVGLGGLGHMAVKFAKAFGANVTVISTSPNKKEEAIQHLGVDSFLISSDHDQMNAAIGTLDGIIDTVSAFHPLSPLIGLLKSHGKLVMLGAPVKPLELPVFPLLLGRKIVAGSHMGGLKETQEMIDFAAKHNVKPEVEVIPIDYVNTAMERLVKADVKYRFVIDIGNTLKANF* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0527 361 Gene3D - 16 353 - -
Lan6g0527 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Lan6g0527 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 359 - -
Lan6g0527 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Lan6g0527 361 Gene3D - 167 323 - -
Lan6g0527 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Lan6g0527 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Lan6g0527 361 CDD CAD1 14 352 - -
Lan6g0527 361 PANTHER ALDEHYDE REDUCTASE 1 359 - -
Lan6g0527 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Lan6g0527 361 SUPERFAMILY GroES-like 9 199 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0527 Lan-Chr6 4579789 4581999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0527 11 360 Monolignol Biosynthesis Gene Families AT4G37990 68.857 1.03e-166 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0527 - K23232 gmx:100816901 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0555 17 4499811 4507235 Lan6g0527 6 4579789 4581999 LSH