Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0518 ATGGAACTTTTTCATTTCATTGCTCTCATTTTAATGTTCTGCTGCAATATTCATTTTGCTCAAGCAAGTGAATTGCCTCCTATCACTGAGACAAGCAATTCAAAGGTATACATTATCCATGTGACTAGGCCAGAGGGTAATCTATTTGCTCAACCAGAAGATTTGGAGGGCTGGTACCATTCATTCATGCCATCTACAACTATGAGCTCTACCGAAAAACCGCGAATGATTCATTCGTACCAGCATGTGTTGAGTGGATTTGCTGCAAGACTCACTCTAGAGGAGCTCAGAGCTGTAGAAAAGAAGAATGGCTTCATTTCGGCTCATCCGGAAAGGATGCTACGCCGTCAAACCACACATAGCCCACAATTCTTAGGCTTGCAGCAATCGAAGGGATTATGGAAGGAGTCAAATTTCGGAAAGGGAGTTATTATTGGGGTAATAGATTCCGGAATAACACCTAATCATCCTTCATTTAGTGGTGAAGGAATCCCACCCCCACCTTCCAAATGGAAAGGGAGATGTGAACTTAATAGGAAAGCTTGCAACAACAAACTCATCGGCGCGAGGTTTATAAACATAGCAGGCAATGCGACGAAAGTGGATCCACCAATTGATCAAGTTGATGATGGACATGGGACTCACACAGCAAGCACAGCAGCTGGTGCATTTGTGAAGCATGCAAATGTGTTCGGAAATGCCGAAGGCACAGCATCAGGGATAGCCCCTTATGCTCATTTGTCAATATACAAAGTGTGTTTAGGAGAAGACTGTGGTGAGAGTAACCTGCTAGCTGCAATAGATGCAGCTATAGAGGATGGTGTGGATATAATATCAATATCCCTTGGTCTAAGTAAACCATCTCCATTTTTCGGAGATAGCATTGCAATAGGTGCATTTGCAGCAATTAAGAAGGGGATATTGGTGAGTTGTGCAGCAGGAAACTCTGGCCCATTTAATGGCACCGTAATTAATGCAGCCCCATGGATTCTCACAGTTGGAGCAAGCACTATCGACAGAACATTTGTCGTAACAGCAAAGCTTGGAGACGGGCAAGAATTCGAAGGTGAATCACTTTTCCAGCCTTCCAATTTTTCTCGAAAATTGCTACCCTTAGCATATGCTGGAAAAGATGGCAAACATGGATCTGCATTTTGTGCTAATGGATCCTTGAGTGACATTGAACTTAGAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGGGGAATTGGAAGAATCGCGAAAGGTCGGGAAGTGAAAAGAGTAGGTGCAGCCGCTATGATTCTCATGAATGATGAAGTCAATGGATTCAGTCTCTTAGCTAATGTGGATGTTCTACCTGCCACTCATGTAAGCTATGTTGCTGGACAAAAGATTAAGGCCTATATAAATTCGACCGCGACGCCTACAACGACCTTTTTATTTAAGGGAACGATCCTTGGAAACTCCCTAGCTCCTGCTGTTGCATCTTTCTCATCAAGAGGTCCTAACTTGCTAAGTCCTGGCATTTTGAAACCAGATATCATAGGGCCAGGTGTGGACATCCTAGCTGCTGCACCATTCCTAGTCGGTAACTCGAAACCCGAATACAACATTATGTCTGGAACATCAATGGCATGCCCTCATCTTAGCGGCGTTGCTGCATTGCTAAAAAGCTCCCATCCTGAATGGTCTCCGGCTGCCATAAAATCAGCCATAATGACATCTTCAGACATACTAAACCTCGGACACAAATCCATTATCGACGAAACACTCGGGCTAGCAAATCTCTTTGCCACGGGTTCTGGCCATGTGAATCCAACAAGAGCAAATGATCCTGGATTAGTTTATGATATCAAACCTGATGATTATATACCTTATTTGTGTGGTTTAGGCTATAGTGATAATCATGTTGGAATCATTGCAAATAGAGCAGTTAAGTGCACTAAAAAATCAAGCATTCATGAAGGAGAACTCAACTATCCTTCTTTTTCTGTTGTGCTTGGTTCCTCACAGAGATTCACAAGGACTGTAACAAATGTTGGTGAGGCATATTCATCTTATGTTGTCATTATTACAGCACCAGAAGGGGTTAAAGTGAAGGTGCAACCAAAGAAGCTTAGTTTTTCAAAAGTGAACCAGAAAGTGAGATTTTCAGTGACATTCATCAAGCATATAGGGTCAGGTAATAAGACAAAGGAATATGCTCAAGGGTTTCTAAAATGGGTCTCTGCTAAATACTCAGTAAGGAGCCCTATCTCTGTCAAATTTGTATAA 2253 0.4261 MELFHFIALILMFCCNIHFAQASELPPITETSNSKVYIIHVTRPEGNLFAQPEDLEGWYHSFMPSTTMSSTEKPRMIHSYQHVLSGFAARLTLEELRAVEKKNGFISAHPERMLRRQTTHSPQFLGLQQSKGLWKESNFGKGVIIGVIDSGITPNHPSFSGEGIPPPPSKWKGRCELNRKACNNKLIGARFINIAGNATKVDPPIDQVDDGHGTHTASTAAGAFVKHANVFGNAEGTASGIAPYAHLSIYKVCLGEDCGESNLLAAIDAAIEDGVDIISISLGLSKPSPFFGDSIAIGAFAAIKKGILVSCAAGNSGPFNGTVINAAPWILTVGASTIDRTFVVTAKLGDGQEFEGESLFQPSNFSRKLLPLAYAGKDGKHGSAFCANGSLSDIELRGKVVLCERGGGIGRIAKGREVKRVGAAAMILMNDEVNGFSLLANVDVLPATHVSYVAGQKIKAYINSTATPTTTFLFKGTILGNSLAPAVASFSSRGPNLLSPGILKPDIIGPGVDILAAAPFLVGNSKPEYNIMSGTSMACPHLSGVAALLKSSHPEWSPAAIKSAIMTSSDILNLGHKSIIDETLGLANLFATGSGHVNPTRANDPGLVYDIKPDDYIPYLCGLGYSDNHVGIIANRAVKCTKKSSIHEGELNYPSFSVVLGSSQRFTRTVTNVGEAYSSYVVIITAPEGVKVKVQPKKLSFSKVNQKVRFSVTFIKHIGSGNKTKEYAQGFLKWVSAKYSVRSPISVKFV* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0518 750 Pfam Subtilase family 140 569 IPR000209 GO:0006508|GO:0008236
Lan6g0518 750 Gene3D - 339 480 - -
Lan6g0518 750 SUPERFAMILY Subtilisin-like 117 607 IPR036852 GO:0004252|GO:0006508
Lan6g0518 750 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Lan6g0518 750 CDD Peptidases_S8_3 117 570 IPR034197 -
Lan6g0518 750 Gene3D Peptidase S8/S53 domain 142 616 IPR036852 GO:0004252|GO:0006508
Lan6g0518 750 CDD PA_subtilisin_like 345 471 - -
Lan6g0518 750 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Lan6g0518 750 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Lan6g0518 750 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Lan6g0518 750 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 747 IPR045051 -
Lan6g0518 750 Pfam Fibronectin type-III domain 650 747 IPR041469 -
Lan6g0518 750 Pfam Peptidase inhibitor I9 37 115 IPR010259 -
Lan6g0518 750 Gene3D - 620 749 - -
Lan6g0518 750 SUPERFAMILY PA domain 380 466 IPR046450 -
Lan6g0518 750 Pfam PA domain 383 458 IPR003137 -
Lan6g0518 750 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 145 156 IPR023827 -
Lan6g0518 750 PANTHER SERINE PROTEINASE 1, PUTATIVE-RELATED 25 747 - -
Lan6g0518 750 ProSiteProfiles Serine proteases, subtilase domain profile. 124 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0518 Lan-Chr6 4444929 4447494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0518 4 749 Subtilisin-like Serine Gene Family AT1G04110 42.186 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0518 - - gmx:100812208 1095.49