Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0508 ATGGGAGATGTGGCTAAGGACCTCACAGCTGGGACTGTTGGAGGGGCAGCACAGTTGATAACTGGACACCCTTTTGACACCATCAAGGTCAAGCTCCAAAGTCAGCCTACACCACTCCCTGGCCAGCTTCCTAAGTATTCTGGTGCAATTGATGCTGTCAAGCAGACAATAGCAGCAGAAGGCCCAAGGGGTTTATACAAAGGTATGGGAGCCCCACTTGCTACGGTGGCCGCGTTTAATGCTGTCCTTTTCTCAGTAAGGGGACAAATGGAGGCAGTGCTGAGGTCCCATCCTGGTGCCCCCCTCACAATAAGTCAGCAAGTTGTTGCTGGAGCTGGTGCTGGAGTTGCTGTTTCCTTTCTAGCTTGCCCCACTGAACTGATCAAATGCAGGTTGCAAGCACAAAGTGCACTCGCTGGTTCTGGAACAGCTACATTGGCAGTGAAATATGGAGGACCAATGGATGTAGCCAGACAGGTTCTCAGGTCAGAAGGCGGCGTAAAGGGCCTATTCAAGGGCTTGGTTCCCACTATGGCACGTGAAATACCAGGAAATGCTGCAATGTTTGGTGTATATGAAGCATTAAAGCAATATCTTGCAGGAGGCCCTGATACCTCTGGACTAGGTAGAGGTTCTCTGATTGTTGCTGGTGGATTGGCTGGAGCATCTTTTTGGGTCATGGTTTACCCAACTGATGTTGTTAAGAGTGTGATTCAAGTAGATGATTATAAAAGTCCAAAGTTTTCTGGTTCAATTGATGCATTGCGAAAGATTCGAGCTACTGAAGGATTCAAAGGCCTTTACAAGGGTTTCGGTCCTGCAATGGCCAGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTATGGGATGA 894 0.4843 MGDVAKDLTAGTVGGAAQLITGHPFDTIKVKLQSQPTPLPGQLPKYSGAIDAVKQTIAAEGPRGLYKGMGAPLATVAAFNAVLFSVRGQMEAVLRSHPGAPLTISQQVVAGAGAGVAVSFLACPTELIKCRLQAQSALAGSGTATLAVKYGGPMDVARQVLRSEGGVKGLFKGLVPTMAREIPGNAAMFGVYEALKQYLAGGPDTSGLGRGSLIVAGGLAGASFWVMVYPTDVVKSVIQVDDYKSPKFSGSIDALRKIRATEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSAMG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0508 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Lan6g0508 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Lan6g0508 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Lan6g0508 297 Pfam Mitochondrial carrier protein 214 295 IPR018108 -
Lan6g0508 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Lan6g0508 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Lan6g0508 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Lan6g0508 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Lan6g0508 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Lan6g0508 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0508 Lan-Chr6 4271566 4274844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0508 149 296 Antiporters AT1G79900 25.974 1.30e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0508 K15109 - gmx:100781634 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0539 17 4299502 4307472 Lan6g0508 6 4271566 4274844 LSH