Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0503 ATGAACAACGAAGACACAGACTTATCTGCTCAAGATCTGGAGAACAATCATCCCCAAAATCTAAATTTGTCACTGAGTTTATCCATTAATCAAAGCGAATCTCAAAATCAGATGACTAGCACTTTTCCTTCTGCCCAAACTGAAGTTAATGTTGGTGCAACAAGATCCGTAGGACAAGAAGGAAGGAACGGTGTCTTGTCAGCAAACACTTCTCGTTTAATACCATCGAAGAGAAGATATTCAGATCTTCAAGGTACTAGAGACTTCATCAGAGGTGAAAGTTCTAGAATTGGTGCTCGAGCTGGAAGAGCTCGACAAAGCCTTGCTTCATCTCAAGCAAACACCAATACCAACTTGATTGGATCTTCTTATCGCAATGAACTACCAGATGGTGACCATTTTCAGGGTGAAACTTTTCGTAATGTAAGACCATTCTCTAATATCCAAAATCCAGTTGGAGAAGTTCAAAGCAATGGGAGTAACTTCAATTTGCAAACAACTACAAATGCAACTGCTACTGCTACTCCTCGTTTTATACTTCCTGCAACTCGCAGATTGCCAAACATCCACCATACATGGGGGTTGCAACTTCCATTAACCAGCACACCACTTTCATTTTTCCAAAGTCACCGTCCTCCTTTCATTAGCTCCTCACCAGGTGCAGCAAATGGTTCAACTTCCTCAGTACAACCAGTTCTGTATGCCCCACATATTATCAGTTCCGTAAATGCTCATCCAATAGGTCGGTCTGTTCATTATGAAACCATAAGTGGAGCTAGACCACCCTTTCTCAACCAAAGAAACATTCATGAAAATGTGGTGCATACCAATCGTGGAATTGGAACGGGAGACCAAGATATTAGTCCAGGGATCACGGGTCTGGCCATTAGACCTACTTATCAGTATGGTTCTTATTATAATACTATTAGACCATCAAATGCTCAAATAAGGGTCACTGGGTCCACCCAACAAAGGCCACAAGTACTAGACCTTTCTCTTGGACTCGGTCATTCTGGAACTGTTAATGAGGGTAGTTCAGCAGCAAGGTTTGAGACTCAACCCCACAACAATTCTGTACCTTTTTTAACTACAATGTTTCAGCTTCCTGACCCGAGAAGTAACGTAAGGTGGCTTAACAGGGATGATCAGGTTAATACTGCCATCAATTTTTTGGAAGCTGCCTTACATCGCCAACAGGTTGGTCACTTGCAATATGAGGATGTAATTGACTTTGCTAGAAATTTGGAGGAACTGATAGAAAGGCATGCTGTCACACAAGAGCAAACTGCTGTGGCGAACATAGGACTAACAGATGAAAATATTCTGAAGTACATTAAGCGTGAAAAGTTTGAGCTTGTTGGCGAGGATACACCTGAAAATAAAGAAAAATGTTGCATTTGTCAGGCAACCTATATCGACGGGGAAGAAGTGGGGAAATTGGACTGTGTTCACAGGTTTCATGTGGATTGTATCAGACAATGGTTAGTGATAAAAAACATTTGCCCCGTGTGCAAACAAACAGGGTTAGCTGTTGATGGAAATGATGAATGA 1551 0.4159 MNNEDTDLSAQDLENNHPQNLNLSLSLSINQSESQNQMTSTFPSAQTEVNVGATRSVGQEGRNGVLSANTSRLIPSKRRYSDLQGTRDFIRGESSRIGARAGRARQSLASSQANTNTNLIGSSYRNELPDGDHFQGETFRNVRPFSNIQNPVGEVQSNGSNFNLQTTTNATATATPRFILPATRRLPNIHHTWGLQLPLTSTPLSFFQSHRPPFISSSPGAANGSTSSVQPVLYAPHIISSVNAHPIGRSVHYETISGARPPFLNQRNIHENVVHTNRGIGTGDQDISPGITGLAIRPTYQYGSYYNTIRPSNAQIRVTGSTQQRPQVLDLSLGLGHSGTVNEGSSAARFETQPHNNSVPFLTTMFQLPDPRSNVRWLNRDDQVNTAINFLEAALHRQQVGHLQYEDVIDFARNLEELIERHAVTQEQTAVANIGLTDENILKYIKREKFELVGEDTPENKEKCCICQATYIDGEEVGKLDCVHRFHVDCIRQWLVIKNICPVCKQTGLAVDGNDE* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0503 516 Pfam Ring finger domain 463 505 IPR001841 -
Lan6g0503 516 ProSiteProfiles Zinc finger RING-type profile. 464 505 IPR001841 -
Lan6g0503 516 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 421 508 IPR013083 -
Lan6g0503 516 SUPERFAMILY RING/U-box 463 507 - -
Lan6g0503 516 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 20 509 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0503 Lan-Chr6 4222298 4227241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0503 385 509 C3H Transcription Factor Family AT2G15530 33.108 7.25e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0503 - - lang:109350901 1023.08