Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0499 ATGGGTGCTGGAGGACCTGACGATGATGACAATAGGTGGCCACCATGGTTGAAGCCATTGTTGAAAGAGACTTTTTTTGTTCAATGCAAGCAACATGCTGATTCTCACAAGAGTGAATGTAATATGTATTGCTTGGATTGTATGAATGGTGCTCTCTGTTCTCTCTGCCTTACTCATCACAAGGACCATCGTGCTATTCAGATTAGGAGGTCCTCATACCATGATGTGATTAGGGTCAATGAGATTCAGAAGGTGTTGGACATCACCGGGGTCCAGACCTACATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAGAGGCCTCAACCAAGGCCTGGGAAAGGTGTCACAAACACATGTGAAGTCTGTGAAAGAAGCCTTCTTGATTCTTACCGGTTCTGTTCTCTTGGTTGCAAGATTGTTGGAACATCTAAGAATTTCCAGAAGAAGAAGCACACATCAGCAATGGCATCAGATTCTGAGGATTCGTACTGTAGCAGCAGCAGCCATGGCAGGCACATGAATTCTAAGTTCCAGAGCTTCACACCATCTACACCACCACCAACTTCAGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGACTAATCATAGAATATTAG 648 0.446 MGAGGPDDDDNRWPPWLKPLLKETFFVQCKQHADSHKSECNMYCLDCMNGALCSLCLTHHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSKNFQKKKHTSAMASDSEDSYCSSSSHGRHMNSKFQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0499 215 MobiDBLite consensus disorder prediction 158 209 - -
Lan6g0499 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 211 - -
Lan6g0499 215 MobiDBLite consensus disorder prediction 158 192 - -
Lan6g0499 215 Pfam PLATZ transcription factor 69 140 IPR006734 -
Lan6g0499 215 PANTHER - 5 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0499 Lan-Chr6 4178462 4180712 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lan6g0499 PLATZ 5.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0499 - - vra:106774881 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0530 17 4151660 4154112 Lan6g0499 6 4178462 4180712 LSH
Lan18g0763 18 13086189 13088708 Lan6g0499 6 4178462 4180712 LSH