Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0494 ATGTTTTCAGCAAAACCAGATGATTCTGAATCCTCACCATCTTCATCATATAGTAGCCCACCAACTATTATAGCTTTTGCCCTGGCCTTGGTTGTGGTGTGTTTTGCTGGTTTCAGCATTGTTTACTTCTGCAGGTGTTATTTATTGAGCAATTTCAACACTTGGGTATTTCAACGTTCAACCTCACTTGGTGGTTCCATTGTTAATAATGTTACTTCTCTCAGTAGGGGGCTTGACCCTTTGGTGCTTCAAACTTTCCCTACATTTCCCTATTCCACTGTTAAAGACCTTCGAAAAGAGAAGTATAGCCTCGAATGCGCAATTTGCTTGCTTGAATTCGAGGATGATAGCATGCTGCGCTTCTTAACCATTTGTTCACATGTTTTTCATCAAGAATGCATTGACCTATGGCTTTGTTCTAACAAGACATGCCCTGTTTGTCGTAAAGATCTTGATTCAGCAATTGGCGAAGCACGAAATTCTCACGAGCGAGCAGAGGACAATGTTAATGTTGAACAAGAGAGAAGGGGTGAGGTATCCATTGATGTAAAAGAAAGCGAAGATCACCGTAGACATAGTGGTGGTAACAATGAAGAGTCAATTCCTATGAGTACGAGCATGCAAACACATGGAGAACACATGTTTTTAAGGTCACACTCGACAGGGCATTCCATAGTTATGATTAGAGGAGAAGATGAAGGGAACAATAATGATAAATATACGTTGAAATTACCGGAGCATGTAGCAGTACTAAACATTGTAGGAGGAGGAAGACACAACCACTCAAAGAGTTGTACAAGTTATAAGGATGTAATAAGGCCTGTTGCACCTTGTAGTAATTGTGGTTATGTTGAAACTGTATCTGGTTGCTCTTCCATTAGGGCTAATGAAAATGTTTAA 900 0.4011 MFSAKPDDSESSPSSSYSSPPTIIAFALALVVVCFAGFSIVYFCRCYLLSNFNTWVFQRSTSLGGSIVNNVTSLSRGLDPLVLQTFPTFPYSTVKDLRKEKYSLECAICLLEFEDDSMLRFLTICSHVFHQECIDLWLCSNKTCPVCRKDLDSAIGEARNSHERAEDNVNVEQERRGEVSIDVKESEDHRRHSGGNNEESIPMSTSMQTHGEHMFLRSHSTGHSIVMIRGEDEGNNNDKYTLKLPEHVAVLNIVGGGRHNHSKSCTSYKDVIRPVAPCSNCGYVETVSGCSSIRANENV* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0494 299 MobiDBLite consensus disorder prediction 158 196 - -
Lan6g0494 299 CDD RING-H2_EL5_like 105 148 - -
Lan6g0494 299 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Lan6g0494 299 PANTHER RING FINGER DOMAIN-CONTAINING 8 270 - -
Lan6g0494 299 Coils Coil 148 175 - -
Lan6g0494 299 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 154 IPR013083 -
Lan6g0494 299 MobiDBLite consensus disorder prediction 158 204 - -
Lan6g0494 299 Pfam Ring finger domain 105 148 IPR001841 -
Lan6g0494 299 PANTHER RING-H2 FINGER PROTEIN ATL29 8 270 - -
Lan6g0494 299 SUPERFAMILY RING/U-box 105 154 - -
Lan6g0494 299 SMART ring_2 106 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0494 Lan-Chr6 4139566 4140465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0494 19 248 Rapid Response to Elicitors AT3G05200 36.402 2.79e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0494 - - gmx:100815505 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0766 18 13112494 13113396 Lan6g0494 6 4139566 4140465 LSH