Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan6g0484 | ATGAGTTTTCAGGACATTGAGGCTGGGAGGCCATTCGCTTCACGGCGAAGCCTAATCAACGGGAAGCAGGACCCTACACAGGCGGTGGCTTCTGGAATATTCCAGATCAACACCGCTGTCTCCACCTTTCAGAGGCTCGTCAATACCCTCGGTACTCCCAAGGACACCCCCGAACTCCGCGAGAAGCTGCATAAGACGAGATTGCATATTGGACAATTGGTGAAGGATACTTCCGCTAAACTTAAGGAAGCTAGTGAAATTGATCACCATTCTAATGTTAATGCAAACAAGAAGATAGCAGATGCCAAGCTTGCAAAAGATTTTCAGGCAGTGTTGAAAGAATTTCAGAAGGCACAGCGTCTTTCAGCTGAGAGGGAAACAGCTTATACTCCTTTTGTTCCACAATCAACTCTTTCTTCCAGCGAAGTTGATGTTACTTCTGATAAGCCTCCTGAACAGCGTGCCCTTCTCATGGAATCCAAAAGACAGGAGGTATTATTCTTAGATAATGAGATTGCCTTCAATGAGGCTATCATTGATGAAAGAGAGCAAGGTATTCAAGAAATCCAGCAACAAATTGGTGAAGTAAATGAGATTTTCAAAGATCTTGCTGTGCTTGTCCACGAGCAAGGAACAATGATCGGCATGCTTGCTTTTGGTGATATTTGGGATTGTGCTTTTAATCGTCATCATTGTGCTTGCTGCTTAGTCAAAGACTCTCAATTCCGTTGTGGATCAAACACATTATATACTTGGGCCACAGATAGGATGCCCCTTGCTGATGATTTCACCGGATTCAATACATGTTGTGGTATTCACACAAGTTTACTGTGA | 834 | 0.4376 | MSFQDIEAGRPFASRRSLINGKQDPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKEASEIDHHSNVNANKKIADAKLAKDFQAVLKEFQKAQRLSAERETAYTPFVPQSTLSSSEVDVTSDKPPEQRALLMESKRQEVLFLDNEIAFNEAIIDEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGTMIGMLAFGDIWDCAFNRHHCACCLVKDSQFRCGSNTLYTWATDRMPLADDFTGFNTCCGIHTSLL* | 278 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan6g0484 | 277 | PANTHER | SYNTAXIN OF PLANTS PROTEIN | 2 | 215 | - | - | |
Lan6g0484 | 277 | SUPERFAMILY | t-snare proteins | 23 | 211 | IPR010989 | GO:0016020|GO:0016192 | |
Lan6g0484 | 277 | Pfam | Syntaxin-like protein | 30 | 129 | IPR006011 | GO:0016020 | |
Lan6g0484 | 277 | PANTHER | SYNTAXIN | 2 | 215 | IPR045242 | - | |
Lan6g0484 | 277 | Gene3D | - | 177 | 216 | - | - | |
Lan6g0484 | 277 | SMART | SynN_4 | 14 | 127 | IPR006011 | GO:0016020 | |
Lan6g0484 | 277 | Gene3D | - | 20 | 133 | - | - | |
Lan6g0484 | 277 | CDD | SynN | 23 | 137 | IPR006011 | GO:0016020 | |
Lan6g0484 | 277 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 176 | 214 | IPR000727 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan6g0484 | Lan-Chr6 | 4039573 | 4042742 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan6g0484 | 1 | 214 | SNARE and Associated Proteins | AT5G46860 | 79.439 | 8.64e-119 | 339 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan6g0484 | - | K08488 | gmx:547656 | 352.443 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan17g0527 | 17 | 4128939 | 4133340 | Lan6g0484 | 6 | 4039573 | 4042742 | LSH | |
Lan18g0775 | 18 | 13184765 | 13188152 | Lan6g0484 | 6 | 4039573 | 4042742 | LSH |