Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0480 ATGGAGCTATTCCCAGCACAACCAGATTTGTCCTTACAAATCAGCCCTCCAAACACTAAACCGACACCAAGTTGGAGGAGAAGTACAACAGATGAAGAAGTGGATTTGGGGTTTTGGAAGAGAGCTTTGGACTCTAGAAAGTTCTTATCATCATCAATGTCCAAAGCTGATGCGATATCTTTTGACCTATCCCTCTCAAATTCAACAAAACCTTCTTCAAACACCAACCTCATTAACCCATTCCAAAACACTACTAATGCAAACAACAACAGCAACAACAACAACAATAACCCTTTCCAATCATTTCATCAAAATCACTACTTTCACCAACAGCAGCAGCATCCACTACTCTTCCAGCCACAGCAACAACAACAGCACCAAAGCCTAAGCCAAGAGCTTGGTTTTCTGAGACCCATCAGAGGAATCCCAGTGTACCAAAACCCTCCTCCTACTATGACATTTCCCCAACTTCAACATCAACAAAATCATCTTCAAGATGCTTCTTCAACTGCCCCTTCACCTATTTCCCACACAGCTACTATATCCCCTTTTCATCATTCTCAAGCTTTGATGCGATCAAGGTTCTTATCGCGCTTTCCTGCGAAGCGAAGCATGAGAGCTCCTCGGATGCGTTGGACAACTACACTCCATGCTCGCTTTGTTCATGCCGTTAAACTCTTAGGTGGTCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTTAAGTCTCATTTACAGATGTACCGAACGGTGAAAACTACAGACAGAGCAGCGGCTTCATCAGGGCATTCTGATGTATACGATAATGGATCATCTGGAGATAACTCTGATGACTTAATGTTTGACATTAACTCTTCAAAAAGGTCTGATCTATCCATTAAGCAGGGAAGGCCAAGTGCTAATCAAGATAAAGAATTTCATGTGCTTTGGAGTAACTCTTCCAGGGAAGCCTTGTTGAACGGCAAGCCAAAGGCTGATTCTGTTAGAAACGTGCTTTCTCTTGAGGATGTGGATCCAAAGTGCCTAAGCTATGAGAGAATATCAGATGGAAGCTCATCCTCAAACCTTTCAGGATCAAGTCCCATAAAGCCTAATTTGGATTTGGAATTCACCTTGGGCCGGCCACTTTGA 1164 0.4304 MELFPAQPDLSLQISPPNTKPTPSWRRSTTDEEVDLGFWKRALDSRKFLSSSMSKADAISFDLSLSNSTKPSSNTNLINPFQNTTNANNNSNNNNNNPFQSFHQNHYFHQQQQHPLLFQPQQQQQHQSLSQELGFLRPIRGIPVYQNPPPTMTFPQLQHQQNHLQDASSTAPSPISHTATISPFHHSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVKLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGHSDVYDNGSSGDNSDDLMFDINSSKRSDLSIKQGRPSANQDKEFHVLWSNSSREALLNGKPKADSVRNVLSLEDVDPKCLSYERISDGSSSSNLSGSSPIKPNLDLEFTLGRPL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0480 387 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 386 - -
Lan6g0480 387 MobiDBLite consensus disorder prediction 11 25 - -
Lan6g0480 387 Pfam Myb-like DNA-binding domain 209 260 IPR001005 -
Lan6g0480 387 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 386 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lan6g0480 387 Gene3D - 207 264 - -
Lan6g0480 387 MobiDBLite consensus disorder prediction 266 292 - -
Lan6g0480 387 MobiDBLite consensus disorder prediction 82 102 - -
Lan6g0480 387 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 208 261 IPR006447 GO:0003677
Lan6g0480 387 SUPERFAMILY Homeodomain-like 205 261 IPR009057 -
Lan6g0480 387 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0480 Lan-Chr6 3979112 3984636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0480 1 386 G2-like Transcription Factor Family AT4G17695 37.897 7.47e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan6g0480 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0480 - - aprc:113868756 490.345