Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0472 ATGGCTTACGAAAACAACCCGTATCGCGATGAAGATGGAGAGGCGTTAATGAATTACGACGATTTTCAATCGGATCGCGAGGCGTCTCCTGATCCCAATCAAAAAGGCGGTCTCATGGACGGTTTAGAAGAAGATGTTGACAATTTGCGCGGCCGTGATCGTTCCCAGACTCCAGTCTTTGATACCGATGATTCCAAGGCGAAACCGAGGAAGAGGCTAATCAAGAAGAGTGATATTGGGAAACAGAAGGTGGCGCCTGAGCTGTATGATGAAGTTGAAGAAGAGGAGGGTGATGCTCTGCGGTTTGGAAGGGAGGGATCTGAAGAAGGGGACGCGAGGAATAAGAGGAAGAAGGGGAATGAGGTTGGGAGTGGGAGGAAGGAGAAGAGGCATAAGGGGGAGAAGAGGTTCGGAGGGAGTAGTAGCAATGTTAATGGTGGGAAGAGCACTCCAAAATTCGGGAGTTTGAGGAGAGGGTCTGTTGGAAACAGAGGGAGGGATCATGACAGTGAAGAAGTTAAGGACATGTGGGATTCAATTGCTGGTGGGGATTCTGAGGATGACCAGGAGGGTCAGAGGAATGTGGATGATGACAACTTTATTGATGATACTGGACTGGAACCTGCTTATTATGGTGATGAAGAACCGCGTTCTCCTGGTGATGCCCCTCAGGCTGAGGAAGGCGAAGAGGATGATGAAATCAAGAATCTTTTCAAGATAGGTAAGAAAAAGAAGAACAAGAGAAGTCCTGCCGAAATAGCTTTACTGGTTGAGAATGTCATGGCTGAACTTGAGGTTACAGCTGAAGAAGATGCTGAACTTAATATTCAGGGAAAACCTGCGATTAATAAACTCAGGAAGTTGCCCCTTCTTACAGAAGTCCTCTCAAAGAAACAACTTCAATTAGAATTTTTGGATCATGGAGTGCTAACTTTATTGAAGAATTGGCTCGAGCCTCTCCCTGATGGAAGCTTACCAAATATAAATATACGCACAGCAATTTTACAGATTTTGAATGATTTTCCTATTGACCTAGAGCACTATGATAGAAGAGAACAGTTGAAGAAGAGTGGCCTTGGAAAGGTAATTATGTTTTTATCAAAGTCCGATGAAGAAATCAGTGTAAATAGGAAATTAGCGAAGGACCTGGTTGATAAATGGAGCCGGCCTATATTTAATAAGAGTACACGGTTTGAAGACATGAGAAATGTCGAGGACGAAAGAGTTCCTTACAGGAGACCATCAGTGAAGAAGCCAGTAAATAGAGCTGCAGGAATGGAATCTAGGGATGGTGACCTTGATTTGGATCTTTCACAGCCTATTTCTGGACAGTCCTCCTCAAGGCAACTCACATCAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCGTCCCCAATCTAAAATTGATCCAGAAGAAATTCGAGCACGAGCAAAAGCTGCTGCACAAGATCAGCAGCGTATGAAGATGAATAAGAAGTTGCAGCAGTTGAGGGCGCCAAAAAAGAAGCAGCTTCAAGCTACAAAATTGAGTGTGGAAGGTCGTGGTATGGTCAAATATTTGTAA 1566 0.4438 MAYENNPYRDEDGEALMNYDDFQSDREASPDPNQKGGLMDGLEEDVDNLRGRDRSQTPVFDTDDSKAKPRKRLIKKSDIGKQKVAPELYDEVEEEEGDALRFGREGSEEGDARNKRKKGNEVGSGRKEKRHKGEKRFGGSSSNVNGGKSTPKFGSLRRGSVGNRGRDHDSEEVKDMWDSIAGGDSEDDQEGQRNVDDDNFIDDTGLEPAYYGDEEPRSPGDAPQAEEGEEDDEIKNLFKIGKKKKNKRSPAEIALLVENVMAELEVTAEEDAELNIQGKPAINKLRKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILQILNDFPIDLEHYDRREQLKKSGLGKVIMFLSKSDEEISVNRKLAKDLVDKWSRPIFNKSTRFEDMRNVEDERVPYRRPSVKKPVNRAAGMESRDGDLDLDLSQPISGQSSSRQLTSRPEATPLDFVIRPQSKIDPEEIRARAKAAAQDQQRMKMNKKLQQLRAPKKKQLQATKLSVEGRGMVKYL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0472 521 MobiDBLite consensus disorder prediction 438 454 - -
Lan6g0472 521 MobiDBLite consensus disorder prediction 1 232 - -
Lan6g0472 521 MobiDBLite consensus disorder prediction 161 200 - -
Lan6g0472 521 PANTHER PROTEIN IWS1 HOMOLOG 1 1 521 IPR044204 GO:0009742|GO:0032784
Lan6g0472 521 MobiDBLite consensus disorder prediction 1 28 - -
Lan6g0472 521 PANTHER PROTEIN IWS1 HOMOLOG 1 1 521 - -
Lan6g0472 521 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 306 394 IPR035441 -
Lan6g0472 521 ProSiteProfiles TFIIS N-terminal domain profile. 311 394 IPR017923 -
Lan6g0472 521 MobiDBLite consensus disorder prediction 38 71 - -
Lan6g0472 521 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 250 397 IPR035441 -
Lan6g0472 521 MobiDBLite consensus disorder prediction 97 128 - -
Lan6g0472 521 Pfam TFIIS helical bundle-like domain 337 391 IPR017923 -
Lan6g0472 521 MobiDBLite consensus disorder prediction 412 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0472 Lan-Chr6 3908176 3912084 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lan6g0472 Med26 1.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0472 K17498 - gmx:100801805 778.859