Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0467 ATGACAGATAGCACAGTATCCTTTTTACTTGACAAGTTGACTTCATTGCTGCAAGAAGAAGTGAATCTGCAGAAAGGGGTGAGTCAAGAAGTTCAGTTCATCAAAGATGAGCTGGAACGCCATAAGGCTATCTTAAGGGTGGCTGATGTTCTAAAAGACAAAGACCCTGAACTCAAAGCATGGCTCAAACGTGTGAGAGATATTGCCCATGATATGGAAGATGCAATAGATGAATTCAATCTCCGCATTGTTGATCACCATGGCCGAAGCAATATCTCTCGTTTTCTTCATAAGCTTGCTAACATGAAAGCTCGACACAGGATTGCTTCAGATATACAAGGGATCAAAGCTAGATTGGAATTTATCTCTAAGGACCGTCCCAACTTATATGGGATAGGCTCAAGCTCGAGTCAACGGTTGTCACCGAGGCATGGCATGCAAGGAGATGCTCTTCTGCTAGAGGAAGCTGATCTAGTTGGTATTGATGCACGTAAAAATCAGATGAGTGATTTACTTTTCAAAGATGAAGCAGGTAGAAAAGTAATTCCTATTTACGGAATGGGAGGGTTAGGGAAAACTACCCTGGCAAAGCAAGTCTACGAGGACCCAAAAGTGAAGAAGCGTTTCAGGTTTCATGCTTGGGTTAATGTTACTCAATCTTACAAGATGCAAGAGCTCCTGAAAGATCTGGTTCAACAGCTCTATAATGTCAAAGGCAAGCCAGCTCCTGAAGCAGTTGGTCAAATGAAAATTGACAAGCTAAAAGAGGAGATCAAGAACTTGCTCAGTAGAAGCAGGTACCTCATCGTGCTGGATGATGTGTGGCATGTAAATCTCTGGGATGCTGTCAAATATGCTTTGCCTAATAACAACCTTGGCAGTAGAGTAATGCTCACCACCCGCAAGAGAGATGTGGCATCGCATTCCTCCGCCGAATCGGGTAAGGTCTATAACCTTGAATTCTTATCTGAGCAAGAAGCTTGGTCTCTTTTCTGCAAGAAGACATTTCAGGGTGACTCGTGCCCTCCTCATCTGGAAGAAGTTTGCCGAAGTATCTTAAAAATGTGCCAGGGTTTGCCACTAGCAATCGTGGCAATCAGTGGTGCTTTGGCTACAAGAGACAGGACAGACATAGAAGAATGGCAGATGGTTTATAGAAGTTTTGGGTCTGAAATTGAAACTAATGACCTACTCGAGGGTATGAAGAGAGTGCTTTCACTTAGTCTGAATGAGTTGCCTTACTATCTTAAATTCTGTTTGCTGTACATAACCATCTTCCCAGAATTCTATGCTGTTGAGCATATGAGATTGATTCGCTTGTGGGTAGCTGAAGGATTTGTCCATGGAGAAGATGGAAAGACAGCAGAGGAAGTAGCAGACAGTTACCTCAAGGAGCTCTTGGACAGAAGTCTGCTGCAAGTGGTGGACAAAACCAGTGATGGCAGGATGCAGACTTGTCGCATGCACGATCTCCTAAGGGAGATTGTCAATTTGAAGTCAAAGGATCAGAACTTTGCAACAGTAGCCAAAGAACAAGACATAATCTGGCCAGACAGAGTTCGACGCCTATCAGTCATAAACACAATGCACAACATACCGCAAAATAAGACCAAATTTAATCTTCGGTCTCTGCTAATGTTTGCCTTATCAGATCCACTTGATCGTTTTTTCATGCGTGCATTATGTCCAACTAGTGGTTATAGGTTGCTTAGGGTGTTAGATTTGCAGGATGCACCTTTGGAGGTTTTTCCTTCTGAAATTGTCAACCTTTACCTTCTGAAGTATCTAAGTTTGAAGAATACAAAGGTGAAAAACATTCCAAGGTCGATTAAGAAGCTTCAGTACCTGCAGACATTAGATCTTAAACATTCCTATGTCACTGAATTGCCAGTTGAAATTGTGGAGCTGCACAGGCTATGCCATCTCCTGGTGTATCGATTTGAGATTAAATCCTATGCTCATTTCCACTCAAGGTATGGCTTCAGGATAGCTGCCTCTATAGGAAAAATGCAATCTTTGCAAAATCTGTGTTCTATAGAGGCAGATCAAAGAAGTAACGCCTTGATGGTTGATCTAGGTAAACTTAATCAACTTAGGAGGCTGGGTATAAGAAAGATGAGGCAAGAAGACGGGTCTGCTTTATGTTCATCCATCGAGAAGATGATCAATCTCCGATCACTGTCCATAACTGCAATTGGAGAAGATGTGATAATTGACATTCAAAACATTTTCAAGCCTCCTCTGTATCTTCAGAGATTATACTTGAGTGGACGTCTAGAGAAGTTTCCCACATGGGTAAGTTCTCTCAAGAATTTGGCAAGAGTGTATCTAAAATGGAGCAGGTTAAATGAGGATCCTCTGGTATATCTTCAAGAGTTGCCAAATCTAAGGCATCTTGAGTTTCTCCAGGTTTATGTTGGTACCACATTGCAGTTCAAGGCTAAGGGGTTTCCAAGTCTGAAGGTGTTAGGCCTTGATGATTTAGATGAACTGACAACTATGGTTATTGAGGAGGGAGCAATGTGTGGTCTTAAGAAGCTGATAATCCAGCGCTGTAAATCATTCAAGGAGGTACCATTAGGAATTGAACACCTAACTAAACTAAAGAAAATTGAGTTTTTTGATATGCCTGATGAATTGATTACAGCACTGCGTCCAGATGGAGGCAAAGATTATTCGAGAGTGCAAAATGTGCCAGCAGTTTATGCCACATATTGGAGGGATGATGGATGGGATGTCTACTCACTAGAGACTTTTGGTGAGAGAGAGACTGATTTCAGTCATAGTGCTTCAATGAGAAGCCATGAACATCACCCCCTCCGGAAGGTTTAA 2832 0.4213 MTDSTVSFLLDKLTSLLQEEVNLQKGVSQEVQFIKDELERHKAILRVADVLKDKDPELKAWLKRVRDIAHDMEDAIDEFNLRIVDHHGRSNISRFLHKLANMKARHRIASDIQGIKARLEFISKDRPNLYGIGSSSSQRLSPRHGMQGDALLLEEADLVGIDARKNQMSDLLFKDEAGRKVIPIYGMGGLGKTTLAKQVYEDPKVKKRFRFHAWVNVTQSYKMQELLKDLVQQLYNVKGKPAPEAVGQMKIDKLKEEIKNLLSRSRYLIVLDDVWHVNLWDAVKYALPNNNLGSRVMLTTRKRDVASHSSAESGKVYNLEFLSEQEAWSLFCKKTFQGDSCPPHLEEVCRSILKMCQGLPLAIVAISGALATRDRTDIEEWQMVYRSFGSEIETNDLLEGMKRVLSLSLNELPYYLKFCLLYITIFPEFYAVEHMRLIRLWVAEGFVHGEDGKTAEEVADSYLKELLDRSLLQVVDKTSDGRMQTCRMHDLLREIVNLKSKDQNFATVAKEQDIIWPDRVRRLSVINTMHNIPQNKTKFNLRSLLMFALSDPLDRFFMRALCPTSGYRLLRVLDLQDAPLEVFPSEIVNLYLLKYLSLKNTKVKNIPRSIKKLQYLQTLDLKHSYVTELPVEIVELHRLCHLLVYRFEIKSYAHFHSRYGFRIAASIGKMQSLQNLCSIEADQRSNALMVDLGKLNQLRRLGIRKMRQEDGSALCSSIEKMINLRSLSITAIGEDVIIDIQNIFKPPLYLQRLYLSGRLEKFPTWVSSLKNLARVYLKWSRLNEDPLVYLQELPNLRHLEFLQVYVGTTLQFKAKGFPSLKVLGLDDLDELTTMVIEEGAMCGLKKLIIQRCKSFKEVPLGIEHLTKLKKIEFFDMPDELITALRPDGGKDYSRVQNVPAVYATYWRDDGWDVYSLETFGERETDFSHSASMRSHEHHPLRKV* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0467 943 PRINTS Disease resistance protein signature 181 196 - -
Lan6g0467 943 PRINTS Disease resistance protein signature 261 275 - -
Lan6g0467 943 PRINTS Disease resistance protein signature 356 370 - -
Lan6g0467 943 PRINTS Disease resistance protein signature 611 627 - -
Lan6g0467 943 Gene3D Ribonuclease Inhibitor 559 892 IPR032675 -
Lan6g0467 943 Pfam Rx N-terminal domain 6 94 IPR041118 -
Lan6g0467 943 Pfam NB-ARC domain 164 410 IPR002182 GO:0043531
Lan6g0467 943 Gene3D - 409 499 IPR036388 -
Lan6g0467 943 Gene3D - 5 109 - -
Lan6g0467 943 Gene3D - 321 408 IPR042197 -
Lan6g0467 943 Gene3D - 146 317 IPR027417 -
Lan6g0467 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 423 IPR027417 -
Lan6g0467 943 PANTHER OS08G0539900 PROTEIN 153 904 - -
Lan6g0467 943 PANTHER OS08G0539900 PROTEIN 1 139 - -
Lan6g0467 943 SUPERFAMILY L domain-like 487 877 - -
Lan6g0467 943 PANTHER DISEASE RESISTANCE PROTEIN RP 1 139 IPR044974 GO:0006952
Lan6g0467 943 PANTHER DISEASE RESISTANCE PROTEIN RP 153 904 IPR044974 GO:0006952
Lan6g0467 943 CDD RX-CC_like 3 124 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0467 Lan-Chr6 3878984 3882412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0467 159 363 WRKY Transcription Factor Family AT5G45050 22.439 1.01e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0467 K13457 - gmx:100305458 1427.54