LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan6g0463	ATGGAAGCTTCATGGGAAGAAAGTGTCACCTATTCTATCAACACAATCTACCTTCTCTTCTCAGCATACCTCGTCTTTGTCATGCAGATTGGCTTTGCCATGATATGTGCAGGCTCTGTACGTGCCAAAAATGCCATGAACATAATGCTCACCAACGTTGTTGATGCTGTTGTGGGTAGCATCTCTTTCTACCTTTTTGGCTTTGCATTTGCTTATGGCAATTCTAATCCCTTCATTGGTACAGATTTGTTTGCTCTAGTTAACATACCAAATGTTACTTACGACTATGCATTCTTCCTTTACCAATGGGCTTTTGCTATAGCCGTTGCAGGCATCACAAGTGGGTCCATAGCAGAGAGAACCCAATTCAGTGCCTATCTTGTTTTCTCATTTTTCCTCAGTGGGTTTGTGTACCCAATTGCAGCCCATTGGGTTTGGTCTCCCAGTGGTTGGCTCAGTCCATTTTCCACTAACTTGTTCTTGAGCTCAGGTGCCATTGACTTTGCAGGGAGTGGAGTTGTCCACTTGGTTGGTGCAATTGCAGGATTATGGGGTTCTATCATTGAAGGTCCACGAGCCGGAAGGTTCGATGCCTTTGGAAAGCCTGTCCCTCTTCGAGGCCACAATGCAACTCTTGTGGTTCTTGGAACATTTTTATTGTGGTTTGGTTGGTTTGGGTTTAATCCAGGCTCATTTGATAAGATTGTAGTGTCTTATCCTGGCACAACATATCAAGGTAATTGGACTTCAATAGGCAGAACTGCTGTGGTAACAACATTAGCAGGCTCTACTGCTGGTATTGTTACATTGTTTGGTAGAAGATTATTAATAGGACATTGGGATGCTATGGATGTTTGTAATGGCTTGCTTGGTGGGTTAGTTGCTATAACTTCTGGTTGCTCTGTTGTTGAGCCATGGGCTGCAATTCTTTGTGGGTTTGTTGCTGCTTGGGTTTTGATTGGGCTCAATATAGTGGCACTTAAAATGAACTATGATGACCCATTAGAGGCTGCTCAATTGCATGGTGGGTGTGGAACTTGGGGTTTGTTGTTTACAGGGTTGTTTGCTAAACAAGAGTTTGTAATTCAAACCTATAATTCAGGTGAGTTAGGTGTGTCAAGACCTTATGGGCTATTACTTGGAGGTGGGTGGGAATTGATTGGAGCTCAAGTGGTTGAGATTTTGGTAATATTTGCTTGGGTTAGTGTAACAATGGGGCCTATGTTCTATGGGTTGCATAAGTTGAATATACTTAGAATTTCTATAGATGATGAAGTTGCAGGTCTTGATATTTCAAGACATGGAGGATATGCTTACGCTCCTCATGAAGATAATTTTCCTCAATCTTATGCAGATTACATGCGTCTCAGGGAAGACCAATCATAG	1386	0.4242	MEASWEESVTYSINTIYLLFSAYLVFVMQIGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGNSNPFIGTDLFALVNIPNVTYDYAFFLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLSGFVYPIAAHWVWSPSGWLSPFSTNLFLSSGAIDFAGSGVVHLVGAIAGLWGSIIEGPRAGRFDAFGKPVPLRGHNATLVVLGTFLLWFGWFGFNPGSFDKIVVSYPGTTYQGNWTSIGRTAVVTTLAGSTAGIVTLFGRRLLIGHWDAMDVCNGLLGGLVAITSGCSVVEPWAAILCGFVAAWVLIGLNIVALKMNYDDPLEAAQLHGGCGTWGLLFTGLFAKQEFVIQTYNSGELGVSRPYGLLLGGGWELIGAQVVEILVIFAWVSVTMGPMFYGLHKLNILRISIDDEVAGLDISRHGGYAYAPHEDNFPQSYADYMRLREDQS*	462

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan6g0463	461	TIGRFAM	amt: ammonium transporter	14	439	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Lan6g0463	461	Pfam	Ammonium Transporter Family	18	439	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Lan6g0463	461	PANTHER	AMMONIUM TRANSPORTER 1 MEMBER 3	1	458	-	-
	Lan6g0463	461	Gene3D	Ammonium transporter AmtB like domains	2	454	IPR029020	-
	Lan6g0463	461	SUPERFAMILY	Ammonium transporter	11	420	-	-
	Lan6g0463	461	PANTHER	AMMONIUM TRANSPORTER	1	458	-	-
	Lan6g0463	461	ProSitePatterns	Ammonium transporters signature.	167	192	IPR018047	GO:0008519\|GO:0016020\|GO:0072488

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan6g0463	Lan-Chr6	3846461	3848190	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan6g0463	8	461	Inorganic Solute Cotransporters	AT4G13510	63.676	0.0	597

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan6g0463	K03320		-	jre:109009016	780.015

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