Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0459 ATGGATAGTATTAGTAGGTATGATAATAATGATGATGGAGGAGTTAGTGGTGGTGTGATGATGAGTATGACCAGAGATACAAAGCCTAGGCTGAGGTGGACGCCTGATCTTCACGACCGTTTTGTGGACGCCGTCACCAAGCTTGGTGGCCCCGACAAGGCTACTCCCAAATCTGTTCTGAGGTTAATGGGCTTGAAAGGTTTAACACTATATCATCTGAAGAGTCATTTACAGAAGTATAGACTTGGACAACACACTCGAAAACAAAATGAAGAACCGCACAAGGAGAACACTAGATGTTCATATGTAAATTTCAGTAGCCATTCTTCAGAACCTAACACCATTTACAGAGGTGATAATGAAAAGGGAGAAATCCCCATTGCAAAAGCACTTAGGCACCAAATTGAAGTTCAAAAGAAATTGGAAGAGCAGCTTGAGGTACAGAGGAAATTGCAAATGAGAATAGAGGCTCAAGGGATGTATTTGCAAGCCGTGTTAGAAAAATCCCAAAGGAGCTTTTCCATGGATGGACCAGACAGGCTAGAAGCATCAAGAGCTAAATTGAATGAATTCAACTCTGTTTTGTCAAATTTTATGGAAAATGTCAATAAAGATTGCAAAGAAAACTTAGTAGGAATGAATGATTTATATAGGAAAGGCCATGGTTCATCATCTTTCCACATTTATCAAGGAGGTATAGAAGAAAATAAGGATCAAAAGTCTAAGGTTGAAGGGGGTATGATACAGTTTGACTTAAACATCAAGGGTAGCTATGACCTTGTATCTGCAGGTGGAGCTGAAATGGAAACCAAGATGCTCTCAGACAGTGTAAACAAGTTTTGA 843 0.3974 MDSISRYDNNDDGGVSGGVMMSMTRDTKPRLRWTPDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQHTRKQNEEPHKENTRCSYVNFSSHSSEPNTIYRGDNEKGEIPIAKALRHQIEVQKKLEEQLEVQRKLQMRIEAQGMYLQAVLEKSQRSFSMDGPDRLEASRAKLNEFNSVLSNFMENVNKDCKENLVGMNDLYRKGHGSSSFHIYQGGIEENKDQKSKVEGGMIQFDLNIKGSYDLVSAGGAEMETKMLSDSVNKF* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0459 280 Pfam MYB-CC type transfactor, LHEQLE motif 126 171 IPR025756 -
Lan6g0459 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 85 IPR017930 -
Lan6g0459 280 Coils Coil 128 158 - -
Lan6g0459 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 19 263 - -
Lan6g0459 280 MobiDBLite consensus disorder prediction 1 21 - -
Lan6g0459 280 SUPERFAMILY Homeodomain-like 27 84 IPR009057 -
Lan6g0459 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 19 263 IPR044848 GO:0003700
Lan6g0459 280 Pfam Myb-like DNA-binding domain 31 81 IPR001005 -
Lan6g0459 280 Gene3D - 27 85 - -
Lan6g0459 280 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 28 83 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0459 Lan-Chr6 3823357 3826842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0459 11 197 G2-like Transcription Factor Family AT3G24120 49.223 2.41e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan6g0459 Myb_DNA-binding 6.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0459 - - gmx:100810146 395.971