LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan6g0453	ATGAGTGTTCCTAATACTCCACCAGCTATGATGTTTATGGCGTCGCAACCACTTTTTACGGTGGCGCAGTGGCAGGAGCTGGAGCACCAAGCTCTTATCTTCAAGTACTTCAAAGCTGGTCTCACTGTTCCCCCAGACCTCCTCGTACCTATTCAAAAGAGCTTGCAATTGATCATGTCTCAACAAAACCACCCTTCTCTGGGGTATTATGGGAAAAAGATAGACCCAGAACCTGGAAGATGCAAAAGAACTGATGGGAAAAAATGGAGGTGTTCAAAGGATGCACACCCTGGTTCTAAATAG	303	0.4587	MSVPNTPPAMMFMASQPLFTVAQWQELEHQALIFKYFKAGLTVPPDLLVPIQKSLQLIMSQQNHPSLGYYGKKIDPEPGRCKRTDGKKWRCSKDAHPGSK*	101

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan6g0453	100	PANTHER	GROWTH-REGULATING FACTOR	13	100	-	-
	Lan6g0453	100	PANTHER	-	13	100	IPR031137	GO:0005634\|GO:0006351\|GO:0032502
	Lan6g0453	100	SMART	QLQ_2	17	53	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Lan6g0453	100	MobiDBLite	consensus disorder prediction	75	100	-	-
	Lan6g0453	100	Pfam	QLQ	19	52	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Lan6g0453	100	ProSiteProfiles	QLQ domain profile.	18	53	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Lan6g0453	100	MobiDBLite	consensus disorder prediction	69	100	-	-
	Lan6g0453	100	Pfam	WRC	76	100	IPR014977	-
	Lan6g0453	100	ProSiteProfiles	WRC domain profile.	75	100	IPR014977	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan6g0453	Lan-Chr6	3784393	3785003	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan6g0453	16	100	GRF Transcription Factor Family	AT3G13960	54.839	1.19e-28	104

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRF	Lan6g0453		QLQ	3e-13	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan6g0453	-		-	lang:109350925	213.772

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan17g0500	17	3883775	3887419	Lan6g0453	6	3784393	3785003	LSH
	Lan18g0809	18	13519238	13522638	Lan6g0453	6	3784393	3785003	LSH