Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0451 ATGTTTACATGCATATCTTGTACGAAGCAAACAGAAGAAGAAAAGGAAGAAGAAGCCCGTGAGGGTGGCACGCCAAGAACAGCCGTCAAAAGCCTCACAACGCAGATCAAGGATATGGCACTGAAGTTTTCAGGGGCTTACAAGCAGTGCAAACCATGCACAGGGTCCAGCAGTACCTACAAGAAAGGACAAAGACCATATCCTGACTTTGACACCATCTCAGAAGGGGTTCCATACCCCTATATTGGAGGCGCAAGCTCTAGCTCAACTCCTGCTTGGGACTTCACTAGCTCCAATCATCCTGGTGGTAAATATATCGGGGGATTTAGTGGTGACAGAAAGCGTGACTCGGCAGCATCATTATCGGTCTGTGACGTTGTGTTGGAAGATGAGGGTGAAGCCAAGGAGTGGATGGCACAAGTGGAGCCAGGGGTTCACATTACATTTGTGTCTCTACCTAATGGGGGAAATGACCTCAAGAGAATTCGGTTCAGCCGGGAGATGTTCAACAAATGGGAAGCTCAAAAATGGTGGGGTGAAAATTACGACCGCATCATGGAACTTTACAACGTGCAGAGATTCAATCGACAAGCTCTCAACACTCCTTCAAGATCTGAGGATGAGCCAAGAGATTCTACTTACTCAAGATTGACATCTGCAAGAGAGAGCCCCATGAACTCATCGTTGAACAGGGATTGGACACCAAGGAGTCACTGTAAACCTTCAGCAATCAGAGGATATAATCCCACTGAACCTTGTAGTCAAAGTGGTGGGGCAGAATTTCATGCAGGGTCATCCATGGAAGCATCAAGGACAACCACCTCTTCTCGAGACGAGCCTTCTATTAGCAATGCCAGTGAGGTAGAGGCTGAGTGGATTGAACAAGACCAACCTGGAGTCTACATTACAATAAGGCAATTAGGTGATGGCACGCGGGAGCTTCGGCGTGTGAGGTTCAGCCGGGAAAAATTTGGAGAGGTACATGCAAAGAATTGGTGGGAAGAAAATAGAGAGCGAATACAAGCTCAATACCTTTGA 1038 0.473 MFTCISCTKQTEEEKEEEAREGGTPRTAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSTYKKGQRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTSSNHPGGKYIGGFSGDRKRDSAASLSVCDVVLEDEGEAKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWEAQKWWGENYDRIMELYNVQRFNRQALNTPSRSEDEPRDSTYSRLTSARESPMNSSLNRDWTPRSHCKPSAIRGYNPTEPCSQSGGAEFHAGSSMEASRTTTSSRDEPSISNASEVEAEWIEQDQPGVYITIRQLGDGTRELRRVRFSREKFGEVHAKNWWEENRERIQAQYL* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0451 345 Pfam Transcription factor regulating root and shoot growth via Pin3 135 189 IPR013591 -
Lan6g0451 345 Pfam Transcription factor regulating root and shoot growth via Pin3 289 344 IPR013591 -
Lan6g0451 345 MobiDBLite consensus disorder prediction 216 235 - -
Lan6g0451 345 MobiDBLite consensus disorder prediction 199 285 - -
Lan6g0451 345 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 345 IPR044532 -
Lan6g0451 345 MobiDBLite consensus disorder prediction 248 283 - -
Lan6g0451 345 ProSiteProfiles BRX domain profile. 135 190 IPR013591 -
Lan6g0451 345 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 345 - -
Lan6g0451 345 Pfam Transcription factor BRX N-terminal domain 28 53 IPR027988 -
Lan6g0451 345 ProSiteProfiles BRX domain profile. 290 345 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0451 Lan-Chr6 3763994 3770605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0451 1 345 Major Intrinsic Protein MIP AT1G31880 67.135 2.30e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0451 - - gmx:100819016 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0499 17 3858414 3867723 Lan6g0451 6 3763994 3770605 LSH
Lan18g0811 18 13530044 13534175 Lan6g0451 6 3763994 3770605 LSH