Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0436 ATGTCCCTTCTCAGCAGATTCTTCTACAAGAGACCCCCAGATGGGTTACTCGAATTCATCGACAGAGTCTACGTTTTCGATTCTTGCTTCTGTACTGAAGCACTACCCGAAGAAATGTATCAACTCTACCTTCACAAAATCATCACCGAGTTGCACGAAGAGTTTCCAGAATCATCTTTTCTCGCTTTCAATTTCCACGAAGGCGAGAAACGAAGCCAATTCGCTGAAATTTTAGTTGAGTACGATGTAACAGTGATAGATTATCCGAAACAGTACGAGGGTGTTCCAATTTTGCCCTTGTCTCTAGTTCAGCATTTTCTTAGTGCTTGTGAGAGTTGGCTTTCACTTGGGCACCATCAAAATGTGATATTGTTCCATTGTGAGAGAGGGGGTTGGCCCCTTTTGGCGTTTTTACTTTCAAGCTTTTTGATTTTCAGAAGGGTGCATAGTGATGAACGTAGAACCCTTGATATGGTTTATAGAGAGGCACCAAAGGGTTTGTTGCAGTTGTTGTCACCTTTTAACCCTTTGCCCTCACAGCTTCGTTATAGTCAGTATGTGGCTAGAAGGAACATTGCACCCGAGTGGCCACCGCCCGAGCGAGCTTTGTCGCTGGATTGTGTCATTCTTAGAGCAATTCCTACTTTTGATTCGCAGAATGGGTGTAGGCCGATGGTTAGGATTTTTGGTAGGAATTTGCTTAGTAAAAGTGGGCTCAAAACTCAGATGATCTATTCCATGCACAAGAAAAAGAAGAGCTTGAAGCATTACTGCCAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGTTTGGTGCAAGGAGATGTGGTGTTGGAGTGTGTCCATATGGATTTGGATCCAGAGAGAGAAGTGATGATGTTTCGTGTTATGTTCAACACAGCATTTATTCGATCCAACATATTGATTCTGGATGCTCAAAACTTGGACATTCTGTGGGATTCAAAGGAACGGTATCCAAAAGGCTTCCGGACTGAGGTTTTGTTTGGAGATGTTGGAAGCATAAGTCCTGTAAGGGCTCCAACAGCCATGTTAAACGACGAGGAGAAAGGTGGATTGCCAATTGAAGCATTTTCAAAGGTTCAAGAACTTTTTAGTGGTGTAGAATGGGATGAAAGTGGTGATGCTGCTGCCGTCTGGCTGCTTCAACAGCTTAGTGTCTTAAATGACGTCAAAGAGTTTTCGAAGTTGCAAGGCAAGGGAAGTTGGTGTTCGCCACCTGCTGACTCTGAAGATGAAAATAATGAATCAAGCACTGCTGATAGTTCAGATTACACTTTTGATGTTATTTCCAAGACTTCTTCTGTTGATCCTTCAAAATTATCGACATCTGATGTCTCTGATTCAGCCCATTTAGCTTTTGAGAGCAATGGTGGAAATCATGAAAGTCTCACTTCAAGAATGCCTGACCAGTCATTAACAGATAATGTTCCAACACCTCATCCTACTACTCAAATTCAGCCTCCATCACCAGCACAAGCACCACTGCCTCCGCCTCCGCCTCCACCTCCGCCTCCACCTCCACCATTGTCTGATAAGACGCCTTCTCTACCCTTGTCTAATAAAGTGCCACCTCCTCCACCACCACCTCCCCCAGGATCTAAACAAACAGGGCCGGGTCCACCGCCTCCACCTCCACCTCCACCTCCTCCAGGATCTAGACAAACAGGGTCGGCCCCACCGCCTCCACCTCCACCTCCTCCAGGATCTAGGCAGACAGGGTCGGTCCCGCCGCCTCCACCTCCACCTCCACCTCCCTTAGGACCTCGATGTATAGCCCCGCCACCTCCATCTCCCACAGGTGCACGAACGGGTTCAGCTCCACCACCCCCACCTCCACCCCTTCCAGGACCTAAGAGGACAGGTTCAGCTCCACCACCCTCTCCAGGACCTAAGCAGACGGGTTCAGCTCCACCACCTCCACCACCAACACCAAGGCCTCCAAGTGCTCCTCCTCCACCACCTGGTCATGGTGCAAGACCAGCACCACCACCTCCACCTGCAGGAAGGGCAGCTGGTGTGCCACCACCAGCAGGCAAATCTTCTTTAGCACCAACTAATGTCGGAAAAGGTCGCGGTACTGGTGGAACCATTGTTCCTACTAAGAAAACTTTGTTAAAGCCCCTGCACTGGGTGAAAGTTGCTCGAGCAGCAAAAGGGAGTCTATGGGCAGATTCACAGAAACAAGATAATGAATCAAGGGCCCCTGAAATTGATATATCAGAACTTGAGAGCCTTTTTTCGGCAGCATCTATTTCTGATGGGAGCAGTACTAAAGGTGGAGGTCGGCGTGGTACTAACATCAACAAACCTGAGAAAGTACAATTGGTTGACTTACGTAGAGCATATAATTGTGAAATTATGCTCTCTAAAATCAAAATTCCTTTGCCTGATATGCTTAATGCAGTTATGGCATTGGATTCTTCTGTTCTGGATATTGACCAGGTTGAGAATCTGATCAAATTCTGTCCCACAAAGGAAGAGATGGAGATGTTGAAGAATTATACAGGGAACAAGGAAATGCTTGGGAAGTGTGAACAGTTCTTTATGGAGCTGATGAGTGTTCCACGTGTAGAAGCCAAGTTAAGGGTGTTTGCTTTTAAAATCAGCTTGTCTTCTCAGGTGAGTGATCTAAGGGTAAATTTGAATACTATCAACGATGCAACCAGAGAGGTGAAAGAATCTGCAAAATTGCGTCAAATAATGCAGACTATTCTTAATCTGGGAAATGCCTTGAATCAAGGAACAGTACGGGGATCAGCAGTGGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAATAGAATGACGTTAATGCATTATCTGTGTAAGCTTCTCGCTGACCAAATGCCGGAATTGCTAGATTTTGACAAGGATCTTATCCATTTGGAAGCAGCTTCTAAGATCCAACTAAAAGCATTGGCGGAAGAAATGCAGGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCACTATTTCTGAAAATGATGGTGCTATATCTAAAGGATTCCGTAAGGTACTGAAGAATTTTCTGCATATTGCTGAAGCTGATGTAAGATCACTTATATCATTGTATGCCGCAGTGGGAAGAAATGCAGATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTAGGTGCCCCTTTGAACAAGTGACTCAAATCCTTTTTGTCTTTGTCAAGACATTCAAGAAATCAAGGGAAGAGAATGAGAGGGTGGCAGATGCTGAAAGAAAGAGATTAGAGAAAGAAGCCATGAAGGAAAAAACAGCAATTAACACGCATTCCAAGAAAGACTGCCTTCAATAG 3351 0.4509 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFCTEALPEEMYQLYLHKIITELHEEFPESSFLAFNFHEGEKRSQFAEILVEYDVTVIDYPKQYEGVPILPLSLVQHFLSACESWLSLGHHQNVILFHCERGGWPLLAFLLSSFLIFRRVHSDERRTLDMVYREAPKGLLQLLSPFNPLPSQLRYSQYVARRNIAPEWPPPERALSLDCVILRAIPTFDSQNGCRPMVRIFGRNLLSKSGLKTQMIYSMHKKKKSLKHYCQADCDVIKIDIQCLVQGDVVLECVHMDLDPEREVMMFRVMFNTAFIRSNILILDAQNLDILWDSKERYPKGFRTEVLFGDVGSISPVRAPTAMLNDEEKGGLPIEAFSKVQELFSGVEWDESGDAAAVWLLQQLSVLNDVKEFSKLQGKGSWCSPPADSEDENNESSTADSSDYTFDVISKTSSVDPSKLSTSDVSDSAHLAFESNGGNHESLTSRMPDQSLTDNVPTPHPTTQIQPPSPAQAPLPPPPPPPPPPPPPLSDKTPSLPLSNKVPPPPPPPPPGSKQTGPGPPPPPPPPPPPGSRQTGSAPPPPPPPPPGSRQTGSVPPPPPPPPPPLGPRCIAPPPPSPTGARTGSAPPPPPPPLPGPKRTGSAPPPSPGPKQTGSAPPPPPPTPRPPSAPPPPPGHGARPAPPPPPAGRAAGVPPPAGKSSLAPTNVGKGRGTGGTIVPTKKTLLKPLHWVKVARAAKGSLWADSQKQDNESRAPEIDISELESLFSAASISDGSSTKGGGRRGTNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLNAVMALDSSVLDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFMELMSVPRVEAKLRVFAFKISLSSQVSDLRVNLNTINDATREVKESAKLRQIMQTILNLGNALNQGTVRGSAVGFKLDSLLKLSDTRARNNRMTLMHYLCKLLADQMPELLDFDKDLIHLEAASKIQLKALAEEMQAVSKGLEKVEQELTISENDGAISKGFRKVLKNFLHIAEADVRSLISLYAAVGRNADSLSQYFGEDPARCPFEQVTQILFVFVKTFKKSREENERVADAERKRLEKEAMKEKTAINTHSKKDCLQ* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0436 1116 SMART it6_source 511 1116 IPR015425 -
Lan6g0436 1116 MobiDBLite consensus disorder prediction 459 488 - -
Lan6g0436 1116 Pfam Formin Homology 2 Domain 707 1078 IPR015425 -
Lan6g0436 1116 MobiDBLite consensus disorder prediction 405 430 - -
Lan6g0436 1116 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 338 IPR035892 -
Lan6g0436 1116 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Lan6g0436 1116 MobiDBLite consensus disorder prediction 415 430 - -
Lan6g0436 1116 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Lan6g0436 1116 MobiDBLite consensus disorder prediction 489 680 - -
Lan6g0436 1116 Gene3D - 197 341 - -
Lan6g0436 1116 Gene3D Formin, FH2 domain 704 1088 IPR042201 -
Lan6g0436 1116 Coils Coil 984 1004 - -
Lan6g0436 1116 MobiDBLite consensus disorder prediction 1083 1116 - -
Lan6g0436 1116 SUPERFAMILY Formin homology 2 domain (FH2 domain) 778 1104 - -
Lan6g0436 1116 MobiDBLite consensus disorder prediction 459 708 - -
Lan6g0436 1116 Coils Coil 1078 1112 - -
Lan6g0436 1116 ProSiteProfiles Formin homology-2 (FH2) domain profile. 703 1103 IPR015425 -
Lan6g0436 1116 SMART PTEN_C2_2 198 338 IPR014020 -
Lan6g0436 1116 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lan6g0436 1116 PANTHER FORMIN-J 1 559 - -
Lan6g0436 1116 PANTHER FORMIN-J 631 1109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0436 Lan-Chr6 3639918 3648972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0436 1 439 FH2 protein (formin) Gene Family AT1G31810 73.576 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0436 - - mtr:MTR_5g026645 1547.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0490 17 3769274 3778306 Lan6g0436 6 3639918 3648972 LSH
Lan18g0823 18 13605903 13615429 Lan6g0436 6 3639918 3648972 LSH