Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0431 ATGAAGGAATCATCATCAAAATCAAAACAATGGAAGCCATTTACAGCAAATTGTTGTTCAAGTAAAGACCAAATAATCTTTACAAATATCAGCAGATGCAAAACCTCACGTTCTGATTTTTCTAAGAACATTGCCCCTTTATCATCATTTAAGAGGCTCTCCTACTCTGACCTTAGCGGTTCGTCTTCTCTACGAATCAACAAGGATATTGCACAGTCTTTTGATCCTGATTTGTATGATTTTCAGCTTAGTGAACTGCATGCAATAACACAGAATTTTTCAAGCACTTTCTTGCTTGGTGGGGGTGAATTTGGAAGAGTGCATAAGGGTTATATTGATGATAAGTTGAGGCAGGGTTTGAAGGCTCAACATGTTGCTGTTAAGCTTCTTGATATTGAAGGATTACAAGGACACCGTGAATGGCTTGCAGAAGTGATATTTCTTGGGCAACTAAGACACCCCAACTTGGTTAAGTTGATTGGTTATTGTTGTGAGGATGAAGAAAGGGTACTTGTCTACGAATTCATGCCACAAGGAAGTTTGGAGAATCAGTTGTTCAAAAGGCTAACATCACTACCATGGGAAACAAGATTAAGAATTGCACTAGATGCTGCTAAAGGCCTTTCCTTCTTGCATGGAGCTGAGAAACCAGTCATTTACAGAGACTTCAAGACTTCCAATGTCTTGCTTGATTCAGACTTCACAGCAAAATTGTCAGATTTTGGACTAGCAAAAATGGGCCCTGAGGGATCAAAATCACATGTTACAACCAGAGTTATAGGCACTGATAGATATGCAGCACCAGAATACATCTCAACAGGGCACTTGACAACAAAATGTGATGTCTATAGCTTTGGGGTAGTCCTTCTAGAACTACTAACTGGAAGGAGAGCTATGGAAAAGACAAGACCAGAGACTGATCAAAACCTTGTGGATTGGTCAAAACCATACTTGAGTAGCAGTAAGAGGTTGAGGTACATTATGGATCCAAGGCTTGCAGGCCAATATTCTGTCAAGGGTTCAAAGGAAATGGCCCTTTTGGCATTGCAATGCATAAGTTTGAATCCTAAAGACAGGCCAACAATGCCAACCATTGTTGAAACTCTGGAAAGCATTCAACAGTGGATGTCAATGCGTACACGGACCCATGGATATCCAAAAATAATACCGGTAACAGGTCGAGTCGGGGTCCGTGTTTTTAGATCCACGGGTAATTAG 1218 0.4064 MKESSSKSKQWKPFTANCCSSKDQIIFTNISRCKTSRSDFSKNIAPLSSFKRLSYSDLSGSSSLRINKDIAQSFDPDLYDFQLSELHAITQNFSSTFLLGGGEFGRVHKGYIDDKLRQGLKAQHVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERVLVYEFMPQGSLENQLFKRLTSLPWETRLRIALDAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVIGTDRYAAPEYISTGHLTTKCDVYSFGVVLLELLTGRRAMEKTRPETDQNLVDWSKPYLSSSKRLRYIMDPRLAGQYSVKGSKEMALLALQCISLNPKDRPTMPTIVETLESIQQWMSMRTRTHGYPKIIPVTGRVGVRVFRSTGN* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0431 405 ProSiteProfiles Protein kinase domain profile. 93 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0431 405 Pfam Protein tyrosine and serine/threonine kinase 99 369 IPR001245 GO:0004672|GO:0006468
Lan6g0431 405 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Lan6g0431 405 Gene3D Phosphorylase Kinase; domain 1 54 175 - -
Lan6g0431 405 SUPERFAMILY Protein kinase-like (PK-like) 75 381 IPR011009 -
Lan6g0431 405 Gene3D Transferase(Phosphotransferase) domain 1 176 385 - -
Lan6g0431 405 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 34 381 - -
Lan6g0431 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Lan6g0431 405 CDD STKc_IRAK 99 372 - -
Lan6g0431 405 PANTHER OS01G0588500 PROTEIN-RELATED 34 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0431 Lan-Chr6 3602323 3604623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0431 81 369 Glycoside Hydrolase AT3G07070 50.340 2.51e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan6g0431 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0431 - - lang:109349029 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0833 18 13687571 13692840 Lan6g0431 6 3602323 3604623 LSH