Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0428 ATGGAGAGCACAAGAATAGGCCAGTGGTTAAACCTTATAGTAGTAAATGTACTGCTATTACTGAAGATAGAAGCTTCTTCTTATGTACCAATCACTTATGTTCAGAATGCAGTAGCCAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCATTTTGATAAGGGATTTGGTGCAGGGATTAATAGTTGGTTAGTTCAATTTGAGGGTGGAGGATGGTGCAACAATGTCACTACTTGCCTTAATCGTAAGAACAATCATTTAGGTTCATCTAAGCAAATGGCCAAGCAAATTGCCTTTTCAGGAATTTTAGGTAACAAGCAACAATTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTACTGTGATGGGGCATCATTTACTGGTGATGTGGAAGCAGTCAATCCTGTAACCAAGTTGCACTTCAGAGGAGCAAGGGTTTTCGCTGCTGTCATTGAGGATTTACTGGTGAAGGGAATGAAAAATGCTCAAAATGCTATTATCTCTGGATGTTCAGCTGGAGGATTGGCTTCAATATTGCATTGTGATCGCTTTCGATCTTTATTACCTAGGGGAGCTAAAGTGAAATGCATCTCAGACGCTGGTTACTTCATCAATGCAAGGGATGTCTCCGGAACACGATACATTGAACAGCTCTTCAGTGAAATTGTTGCCACACATGGATCTGCAAGAAATTTGCCTCCATCCTGCACTTCAAGACTCAGCCCAGGGATGTGCCTTTTCCCGCAATATTTTGTATCGCAAATCGCTACACCAATCTTTCTTATAAATGCGGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCCCATGGCCGTTGGCATAGCTGCAAGCTTGATATAAACAACTGCTCACCTAATCAACTTGGTACAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCATTGACAGTGCTAGGGAACTCTCAATCTAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACTGAAATGCAAGAGACATGGTTTACAACTGACTCTCCCCTACTGGCTAAGACAACAATTGCAGAGGCAGTAGCAGACTGGTTTTATGATCGAAGGCTTTTCCATCAGATAGATTGCGCTTACCCTTGCAATCCAAGTTGTCACAACCGCATTTTTTATCAAGACAACCCTGGAAAAAATGTGTCTACGGAAGATACATCGGATGCATCAGCAAGAAATGCAAGTTTTCCAAAATTATCTAACAAGGCACAATGGATTGAGCTTTTGTGCATCAAACATGGGATAAGTGGGCTTCTACTTACTTTTGCTATTTTGAGCAAGAAGGAATAA 1353 0.4161 MESTRIGQWLNLIVVNVLLLLKIEASSYVPITYVQNAVAKGAVCLDGSPPAYHFDKGFGAGINSWLVQFEGGGWCNNVTTCLNRKNNHLGSSKQMAKQIAFSGILGNKQQFNPDFYNWNRIKVRYCDGASFTGDVEAVNPVTKLHFRGARVFAAVIEDLLVKGMKNAQNAIISGCSAGGLASILHCDRFRSLLPRGAKVKCISDAGYFINARDVSGTRYIEQLFSEIVATHGSARNLPPSCTSRLSPGMCLFPQYFVSQIATPIFLINAAYDSWQIKNILAPGVADPHGRWHSCKLDINNCSPNQLGTMQGFRTEFLRALTVLGNSQSKGMFIDSCYAHCQTEMQETWFTTDSPLLAKTTIAEAVADWFYDRRLFHQIDCAYPCNPSCHNRIFYQDNPGKNVSTEDTSDASARNASFPKLSNKAQWIELLCIKHGISGLLLTFAILSKKE* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0428 450 PANTHER PECTIN ACETYLESTERASE 3 409 - -
Lan6g0428 450 PANTHER NOTUM-RELATED 3 409 IPR004963 GO:0016787
Lan6g0428 450 Pfam Pectinacetylesterase 25 373 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0428 Lan-Chr6 3580425 3586992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0428 5 393 Carbohydrate Esterase AT4G19420 61.557 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0428 K19882 - gmx:100776478 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0481 17 3704258 3708981 Lan6g0428 6 3580425 3586992 LSH