Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0418 ATGGGAGGGTTGTTGCACTTTTTTGAGTTCAATCAGGGGAGGATGGCCAAGAAAGTCCACGCTCACAAGAAAAATCATGGTGGCCTGGCTCCTCCTCAAAATAGACTGGATTCGCAAGCAGAAACATCTCACAATCCACAAAGAGAACTACCATACTCTTATCAAGTAGAAGACTGGTCTGAGAATAATTGTTACTCAAATGTGGCTTCAATGAAAAATTTGATCAATGAGGAGCTATCCAAAGGATCAAGCACCAAACAAAATGTGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATATGATGCCACTGGACACGAAATCTGCTGTTCCATCAGAAAGAATAAGGGAAAATATGGGGAAGAAACTTTCAAAAAAGGGAATGAATGGAAACAATTCGATTAGTCGGGGTTCCTCCAACTTCAGTTATTCTAAGCAGACGGAATTAGACTCACTTTATGGACACGGATATGATGCTGGATGGAGCCCGAGTTTCCGAGAAGCAAGGTCGCAGGAACATCCTCAGGAAGAGGAACTCCAGAAATTTAAGAAAGAGTTTGAAGCATATCAAGAAGCAAGGTTTGTGGAGTGTTCAAAGGTTGCTGATATTGGCAGTGTGCCTAGACGATTGCGTGCTCAAGAAAACCTGAACAATGAAAAGGTGGCACATAATGCAAGTTCACGGAGAGCAGCAAGAGAGAAACTTGCAGAATATGGTGGTGATATGACGGAGTTAATCCCAACTATGCCAAAGCAAGCCTTTCCTTCAAGGAGCAGAACACTTAGTAGAGACTTTGAGGAGTGCTTAATGTTGAAATCTAAAAACAGATTAGATAGATCTTCTTCTCCTACTCATATAGTTATCTTGAAGCCTGGTCTTGATAGCATTTGCAACAATGAAGAGAGTTGGAGCAGTTCTTCAAGTACTTTACAAGGGAGTAGTATAGAAGAATTTCTTGAGGAAGTGAAAGAGCGGTTGAAATGTGAACTACAACAAGGGAAAACTTCCAAAAAATGTTCAGTGGTTCGAGGAAGTGGAATTGAGACACCTTACACCGAAAAACCATGTGATCATAAACCAATAGGCTGTCATATAGTAAAACCGGTGACCAGAGATACTGAATCAAATTTACTACGTTCCGAATCAGCAAGATCATACACAAGTGAAATGCAGTTCCATGGGCCAAGTTCTCCAGAATTTATCAATAGAGATACCAGGAGGTTTTTGTCGGAGAGGCTAAGAAATATCATGAAATGCGAAACACATGTTGACATTCCTGAAGTGATATATAGAAACTCCAGATCTAATGCATTAGATGATCACAGAGTTAGACTAAATGCAGGAGATATTATCAAGTGTGCCAATGGCATGAGCTACTCAGAAGAGGAAAACGAAATCCAAACAGGATCTTTCAGGCATGAACCAGAGCCAGATGGGAATACATTGCCCCGCTGCCACAGGGATTTGTCCCCTAGGAACCTTGTCAGATCCTTGTCTGCTCCTGTATCAGGATCAGGAACGTCATTCGGGAAGCTTCTTCTAGAGGACCGCCACATTTTTACTGGTGCCCAAATTCAGAGGAAGGTTGAAGCTGTTGAAAACAATTCGGTTGATGTTAAAAAACGGCGAAAAGATAGATTTAGTATTAAAGAAAAGGTCTCCAGTTTTAGATATAGTCTTAATCTAAGAAAGAATATTTTTGGAAAAAGGAATCAGTCGATGGCAGAATCACATGTCAACGAATATGTTCCAATGGTGAGAGATATCAGAAGTGGACCAACAGTTCTCATGAACTATGGTGATAGGCATGAGAACTCCACTGAGGTGCCTCCTAGTCCTGCATCTGTGTGTAGCAGTGTTCATGATGAACTCTGGAGGCAGGTAGAATATTTAAGTCCAATATCAACTCCAGATGTGTCTTCAAGAGACAACAATGTTGTGTCCCATGTTTTCAGAGATATCAGCTCTGGTTTGAACGAGGTAAGGAAGAAACTCAGTCAACTTGAGTCCGATAGCGTCGACGAATTCATTACGAAACAGGAGGCTGAGCCTGATGAGTCTGAATTAGTTCAAATAGAGGATCCAGCAGAATCATACATAAGAGATCTACTTATTGCTTCTGGTCTGTACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTGGAAGCATCTCATAAGAAATCGGTCAAGGAGAGTAATGATATGTCTACAAAGGACCACAAGGTTTTACTTGATTTGTTGAATGAGGCACTTTCACTAGTTCTTGGACCACCTTTGACATGGTCTAGATTCAAAAGGAAGTTATGCAACACTTCAGTGATGCTACCACCTTATGGAAAGGAACTATTGAAGTTAGTATGGGACATAATCCGTATCTCTTTACATCCTCCATGTGACATATGTCCTTATTCACTTGATACTTTGGTGGCTCAACATTTGGAGTCTATCCCTTGGTCTAGATTAACATATGAAGAGATGAATCTATTAGGAAGAGATATAGAATGTCTAATAACTAGTGATCTTGTTGAAGAAATCACAAAGGATATGCTCTAA 2598 0.4065 MGGLLHFFEFNQGRMAKKVHAHKKNHGGLAPPQNRLDSQAETSHNPQRELPYSYQVEDWSENNCYSNVASMKNLINEELSKGSSTKQNVPSLVARLMGIDMMPLDTKSAVPSERIRENMGKKLSKKGMNGNNSISRGSSNFSYSKQTELDSLYGHGYDAGWSPSFREARSQEHPQEEELQKFKKEFEAYQEARFVECSKVADIGSVPRRLRAQENLNNEKVAHNASSRRAAREKLAEYGGDMTELIPTMPKQAFPSRSRTLSRDFEECLMLKSKNRLDRSSSPTHIVILKPGLDSICNNEESWSSSSSTLQGSSIEEFLEEVKERLKCELQQGKTSKKCSVVRGSGIETPYTEKPCDHKPIGCHIVKPVTRDTESNLLRSESARSYTSEMQFHGPSSPEFINRDTRRFLSERLRNIMKCETHVDIPEVIYRNSRSNALDDHRVRLNAGDIIKCANGMSYSEEENEIQTGSFRHEPEPDGNTLPRCHRDLSPRNLVRSLSAPVSGSGTSFGKLLLEDRHIFTGAQIQRKVEAVENNSVDVKKRRKDRFSIKEKVSSFRYSLNLRKNIFGKRNQSMAESHVNEYVPMVRDIRSGPTVLMNYGDRHENSTEVPPSPASVCSSVHDELWRQVEYLSPISTPDVSSRDNNVVSHVFRDISSGLNEVRKKLSQLESDSVDEFITKQEAEPDESELVQIEDPAESYIRDLLIASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEASHKKSVKESNDMSTKDHKVLLDLLNEALSLVLGPPLTWSRFKRKLCNTSVMLPPYGKELLKLVWDIIRISLHPPCDICPYSLDTLVAQHLESIPWSRLTYEEMNLLGRDIECLITSDLVEEITKDML* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0418 865 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 864 - -
Lan6g0418 865 MobiDBLite consensus disorder prediction 466 483 - -
Lan6g0418 865 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 864 - -
Lan6g0418 865 MobiDBLite consensus disorder prediction 463 483 - -
Lan6g0418 865 MobiDBLite consensus disorder prediction 18 47 - -
Lan6g0418 865 Pfam DUF761-associated sequence motif 89 103 IPR032795 -
Lan6g0418 865 Pfam Domain of unknown function (DUF4378) 698 859 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0418 Lan-Chr6 3331998 3337213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0418 71 864 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.647 4.46e-150 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0418 - - adu:107487403 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0869 18 14050443 14055757 Lan6g0418 6 3331998 3337213 LSH