Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0404 ATGGAGAGAAGAACCTGTGAGGAATTAACGCCCAGGTATTATGGCCTTTGTGCCATTGCAGGAATGTTCAGTGCTGCCACTACCCATCTTGCTATCACTCCTCTTGATGTCTTGAAAGTTAACATGCAGGTGCACCCAATTAAGTATTATAGCATTTCCTCCAGCTTTACTACCTTAATGAAGGAGCAAGGGCCTTCTGCACTCTGGAGAGGTTGGACCGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGCTGTAGATTTGGTCTCTATGAATATTTCAAGGGTGCTTATTCTAACATATTGGTAGACCAGAACAGAAATCTTGTTTACCTTCTTAGTAGTGCATCTGCTGAAGTATTTGCCAATGTAGCTCTGTGCCCATTTGAAGCTATCAAAGTGAAGGTTCAAGCTCAACCCTGTTTTGCCAAGGGCCTGTTTGATGGCTTTCCGAAGTTATATGCATCAGAAGGCATACAAGGATTCTACCGTGGACTTGTACCACTTTTGGGTCGAAACATCCCGTTTTCCATGGTTATGTTCTCAACATTCGAGCATTCCGTTGATCTTTTGTATCGCAATGTTGTTAAAAGAAAAAAAGAGGATTGTTCTAAAGTTCAACAGCTCGGTGTGACATGTTTAGCTGGATATGCAGCTGGATCTGTTGGAAGCTTTATTTCTAATCCTGCTGACAATGTTGTTGCTTCTCTTTATAACAGAAAGGCTGATAGTCTTGTGCTGGCTATCAAAAAAATTGGGCTAGCTAATCTATTTACAAGGAGCCTTCCTATTAGAATGTTGGTGGTTGGTCCTTCTATTACTCTGCAATGGTTTTTCTATGACACCATCAAAATTTTAGGTGGACTGCCAACTAGTGGTGAAGTTGCAAGTGACTTGAGAGGAGATGAGGCAGGCTAG 915 0.423 MERRTCEELTPRYYGLCAIAGMFSAATTHLAITPLDVLKVNMQVHPIKYYSISSSFTTLMKEQGPSALWRGWTGKFFGYGAQGGCRFGLYEYFKGAYSNILVDQNRNLVYLLSSASAEVFANVALCPFEAIKVKVQAQPCFAKGLFDGFPKLYASEGIQGFYRGLVPLLGRNIPFSMVMFSTFEHSVDLLYRNVVKRKKEDCSKVQQLGVTCLAGYAAGSVGSFISNPADNVVASLYNRKADSLVLAIKKIGLANLFTRSLPIRMLVVGPSITLQWFFYDTIKILGGLPTSGEVASDLRGDEAG* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0404 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 96 IPR018108 -
Lan6g0404 304 SUPERFAMILY Mitochondrial carrier 15 281 IPR023395 -
Lan6g0404 304 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 2 301 IPR044677 GO:0005315|GO:1990547
Lan6g0404 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 285 IPR018108 -
Lan6g0404 304 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 189 IPR018108 -
Lan6g0404 304 PANTHER PHOSPHATE CARRIER PROTEIN 2 301 - -
Lan6g0404 304 Pfam Mitochondrial carrier protein 18 97 IPR018108 -
Lan6g0404 304 Pfam Mitochondrial carrier protein 107 193 IPR018108 -
Lan6g0404 304 Gene3D Mitochondrial carrier domain 17 284 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0404 Lan-Chr6 3245777 3249987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0404 7 294 Chloroplast and Mitochondria Gene Families AT2G17270 66.436 4.48e-150 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0404 K15102 - gmx:100788561 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0860 18 13980768 13984952 Lan6g0404 6 3245777 3249987 LSH