Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0398 ATGGTTTCTTCCAGTTATGCTAAAAGCAGTGCCTTCTTTTATCTGATTCTTGCTGTGCTTATTGCAAAAACCAGCTTTTGCTTTTCTGCCAAGGTTTATGTGGTGCACATGGGAAGCAAAACTGGCCAAGACCCAGATGAAATTATTAAGGAAAACCATCAAATTCTTGCTTCTGTTCATAGTGGAAGTGTTGAGAAAGCCCAAGCTTCACATGTTTATAGCTATAGACATGGTTTCAGAGGCTTTGCAGCCAAGATAACTGATGAACAGGCTTCACAAATTTCAAAGATTCCAGGAGTGGTTTCTGTTTTTCCCAATTCTAAAAGAAAGTTGCACACCACTCATTCATGGGACTTTTTGGGTCTTATGAATGATGAAGCCATGGAGATTCAAGGACACTCCACAAAAAACCAGGCAAATATCATTGTGGGTTTCATTGATACAGGAATTTGGCCTGAATCTCCAAGCTTTAGAGACACTGACATGGCACCAGTGCCACCCGGATGGAAGGGCCATTGTCAAATAGGAGAAGCATTCAATTCTTCATCTTGCAACAGGAAAGTGATAGGAGCTAGATACTATATGAGTGGATATCTAGCAGAAGAAGGGTCAGACAAAAAAGTCTCTTTCAGATCTCCCAGAGATAGCTTAGGTCATGGGAGCCATACTGCTTCCACAGCAACCGGGCGCTACGTGACAAACATGAATTATAAGGGGCTTGCAGCTGGAAGAGCTAGGGGAGGTGCACCTATGGCTAGGATTGCTGTGTACAAAACATGTTGGAGTTCGGGTTGCTATGATGTGGACTTACTAGCTGCATTTGATGATGCAATAAGAGATGGGGTTCACATTATATCTTTGTCTCTGGGCCCTGAAGCTCCTCAAGGTGACTATTTCAAAGATGCCATATCTGTGGGGTCATTTTATGCTGCTAGGCATGGGGTGCTGGTGGTGGCATCAGCTGGCAATGAAGGAAGTCCTGGTTCTGTAACCAACCTTGCACCATGGATCATCACTGTTGCTGCTAGTTCAACAGATAGGGATTTCACCTCTGATATCATGTTAGGAAATGGTGTCAACATCACGGGTGAAAGTCTCAGTCTCTTGGAAATGAATGCCTCCACAAGAATAATGTTTGCGGCTGATGCCTTTGCAGGATATTTTACGCCTTATCAATCCAGTTACTGTTTAGATAGCTCCCTAAATAAGACCAAGAGCAAAGGGAAGGTTCTGGTGTGTAGACATGCTGAGAGTTCAACAGAGTCAAAGTTGGAAAAAAGTAAGGTAGTTCAGGAGGCAGGTGGGGTTGGGATGATACTTATTGATGAGACAGATCAAAATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTGTGGGAAAGAAAGCAGGGGAACTAATTCTGTCCTATATCAATAGCACACGTAAGCCTATGTCAAGGATATATGGAGCCAAGACGGTACTAGGAACTCAGCCTGCACCCCGTGCAGCAGCATTTTCTTCTAAAGGCCCCAATGCTTTAACACCAGAAATTTTGAAGCCTGATATTACTGCTCCCGGATTAAACATCCTCGCGGCATGGTCTCCAGCAGCAGCTGGAAACATGAAGTCCAATATTCTGTCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCGGCTTTAGTCAAAGCTGTCCATCCTTCATGGTCTCCGTCTGCTATCAAATCTGCCATAATGACAACTGCTATAATTCTTGATAAGCACCACAAACCCATTAGAGCGGATCCTGATAGAAGGGCTGATGCCTTTGATTATGGATCAGGATTTGTGAATCCCACAAGAGTTCTTGATCCTGGTCTTGTCTATGATTCACAGCCAGAAGATTTTGTTGCATTCCTCTGTTCACTTGCTTATGATGAGAGATCACTCCATTTTGTTACAAGAGACAACAGTACATGTGATGGGGCATTCAAAACTCCATCCGACCTCAACTATCCATCTATTTCAGTGCCAAATCTTGAAGATAAACTATCAGTAACTCGAGTTGTGACTAATGTTGGAGAAGCAAGAAGTATATATAAAGTTGTAGTCGTCCCTCCTGCTGGAGTTAATGTTACTGTTGTGCCAAACCAGTTAGTCTTCACAAGAATAGGACAGAAAATCAAGTTTACTGTGAATTTCAAAGTGGCCTCTCCTTCAAAGGGCTATTTGTTTGGGTTCTTGGCATGGAAGAATGGAAGAACACAGGTTACTACTCCTTTAGTTGTTCAAGTTGTATCAACAAGCCTTGGGTTGGTCAGATAA 2289 0.4303 MVSSSYAKSSAFFYLILAVLIAKTSFCFSAKVYVVHMGSKTGQDPDEIIKENHQILASVHSGSVEKAQASHVYSYRHGFRGFAAKITDEQASQISKIPGVVSVFPNSKRKLHTTHSWDFLGLMNDEAMEIQGHSTKNQANIIVGFIDTGIWPESPSFRDTDMAPVPPGWKGHCQIGEAFNSSSCNRKVIGARYYMSGYLAEEGSDKKVSFRSPRDSLGHGSHTASTATGRYVTNMNYKGLAAGRARGGAPMARIAVYKTCWSSGCYDVDLLAAFDDAIRDGVHIISLSLGPEAPQGDYFKDAISVGSFYAARHGVLVVASAGNEGSPGSVTNLAPWIITVAASSTDRDFTSDIMLGNGVNITGESLSLLEMNASTRIMFAADAFAGYFTPYQSSYCLDSSLNKTKSKGKVLVCRHAESSTESKLEKSKVVQEAGGVGMILIDETDQNVAIPFVIPSAIVGKKAGELILSYINSTRKPMSRIYGAKTVLGTQPAPRAAAFSSKGPNALTPEILKPDITAPGLNILAAWSPAAAGNMKSNILSGTSMACPHVTGIAALVKAVHPSWSPSAIKSAIMTTAIILDKHHKPIRADPDRRADAFDYGSGFVNPTRVLDPGLVYDSQPEDFVAFLCSLAYDERSLHFVTRDNSTCDGAFKTPSDLNYPSISVPNLEDKLSVTRVVTNVGEARSIYKVVVVPPAGVNVTVVPNQLVFTRIGQKIKFTVNFKVASPSKGYLFGFLAWKNGRTQVTTPLVVQVVSTSLGLVR* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0398 762 Gene3D - 628 754 - -
Lan6g0398 762 Pfam Subtilase family 140 582 IPR000209 GO:0006508|GO:0008236
Lan6g0398 762 CDD Peptidases_S8_3 110 578 IPR034197 -
Lan6g0398 762 Gene3D - 346 488 - -
Lan6g0398 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Lan6g0398 762 Pfam Fibronectin type-III domain 657 751 IPR041469 -
Lan6g0398 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 755 IPR045051 -
Lan6g0398 762 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Lan6g0398 762 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Lan6g0398 762 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Lan6g0398 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 112 IPR037045 -
Lan6g0398 762 ProSiteProfiles Serine proteases, subtilase domain profile. 116 611 - -
Lan6g0398 762 Gene3D Peptidase S8/S53 domain 140 624 IPR036852 GO:0004252|GO:0006508
Lan6g0398 762 Pfam PA domain 384 466 IPR003137 -
Lan6g0398 762 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Lan6g0398 762 SUPERFAMILY Subtilisin-like 13 712 IPR036852 GO:0004252|GO:0006508
Lan6g0398 762 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 755 - -
Lan6g0398 762 CDD PA_subtilisin_like 355 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0398 Lan-Chr6 3187170 3191980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0398 7 752 Subtilisin-like Serine Gene Family AT4G10520 42.126 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0398 - - gmx:100780538 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0853 18 13912535 13931210 Lan6g0398 6 3187170 3191980 LSH