Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0396 ATGCTTTCACTCCAATGCAATCTCAGCCGCCACAATAAGCCTATCATGGTTCCACGGTCAAGCCTCACCGCCACCATCACCGCCATCATCACCATACTCCTCCTGCTCCCCGCCACAACCTCTCAAGCTCAGATTCTTAAATCTGAGGACCACGTTTATGGTCCCTTCAACTCTTCTTACATCTATGGTCCCCTTATCAACATCTTCCATGTCATACCCAGCGCTTCCATCAACCAAGGTGCTCTTCAAATCACTCCTGACAGCGCCGGCAACATCTCCTTCCACAACAACTCCGGCAGAATCTTCTATAATAAACCCTTTAAGCTCTGGGATGATCACGATGGTGCACTTGCTTCTTTTAACACTTCATTCCTTATCAATGTGTACCGAGTAAATAAAACACCCGGTGAAGGCATAGCCTTTGTTATTGCACCTTCTCTCTCTATTCCTCTTAACAGCTACGGCCAATACCTCGGCCTCACCAACGCCACCACCGACGGCAGCGGAGCAAATAAATTAGTCGCCGTTGAACTCGACACCGTGAAGCAAGATTTTGACCCTGATGATAATCATATTGGACTTGACATCAATAGCGTGAGGTCTAACGTGAGTGTTTCTTTGTCCAAGTTAGGGATTCAGATCTCTCCGAACGGCACAGTGTTCCATGTGCTATGGGTGGAATACGATGGAGAACGCAAGGTCATTGATGTTTACATGGCGGAACAGGATGATAAGGATGCTCCTATAGCGGCAAAGCCAACAAAGCCTGTGTTGAGTTCGAGTCTTGATCTCAAAAGTTTGGTGAATCAAGAGTCTTATTTTGGATTTTCTGCATCAACTGGAGTCACTTATGAGTTGAACTGTGTGTTGAGATGGAATATATCTATGATGGTATTTCCTGAGAACAAGAGTAAAGATTGGAATGGCATCACGATTGGTTTGGGTGTTGGAGTGCCTCTGGTTTTGATAGGGATTGGTGGGTTGGTGTATTTTCTGTTAAAGAAGAAAAGGGCAGGTTCTTATTCTGACCCACAAATTATGGGCACCTTGAAGAGTCTCCCAGGTACTCCTAGAGAATTTATATATCAGGAATTGAAGAAAGCTACTAACAATTTTGATGAAAAGAATAAGCTTGGACAAGGTGGGTATGGTGTGGTTTACAAAGGAACACTGCCAAAGGAGAATTTGGAAGTAGCTGTTAAGATGTTTTCAAGGGACAAGATGAAAAGTACAGATGATTTTTTGTCTGAGCTTACCATAATCAATCGTCTCCGTCACAGACACCTTGTTCGTTTACTAGGGTGGTGTCACAAAAACGGGGTATTGCTGTTAGTATATGAATATATGCCTAATGGTAGCTTGGACAGTCATATTTTTTGTGAGGAAGGGTCAACTATTGAAACTACTCTAAGTTGGCATCTGAGATATAAGATCATATCTGGGGTAGCTTATGCATTGAATTACTTACACAATGAGTATGATCAAAAAGTGATACACCGAGATCTCAAGGCCAGCAACATCATGTTGGACTCCGACTTCAATGCTCGTCTAGGCGACTTCGGCTTGGCACGCGCAATTGAGAATGAGAAAACATCATATGCAGAGTTGGAAGGAGTACATGGGACTATGGGATACATTGCACCCGAATGCTTTCACACAGGTAAGGCCACTCGCGAATCGGATATTTATGGATTCGGCGCTGTCCTACTAGAAGTTGTGTGCGGTCAGCGACCATGGACAAAGATCGAGGACTATCAGTTGTTGGTGGATTGGGTTTGGTACTTGCATAGGGAGAGAAGGATACTGGAAGCAGTAGATCCTAGACTTGAGAGCAATTATGTGATTGAAGAGGCAGAGAGGATATTGAAACTAGGACTAGCTTGCTCTCATCCCATTGCTAGTGAAAGACCGAAAATGCAAGCAATTGTTCAAATCATATCTGGGTCAGTGCCTGTGCCTCATGTCCCACCCTTCAAGCCATCTTTTGTGTGGCCAGCTATGGATTTTAGCAACTTTGATAGTGAGATTACAGCAACAAGTACTACAGAGTATTCACCCTTCAACACACAGTCTTCTTCTGTGCACGTTGGATTATCTGATGTCTAG 2106 0.4402 MLSLQCNLSRHNKPIMVPRSSLTATITAIITILLLLPATTSQAQILKSEDHVYGPFNSSYIYGPLINIFHVIPSASINQGALQITPDSAGNISFHNNSGRIFYNKPFKLWDDHDGALASFNTSFLINVYRVNKTPGEGIAFVIAPSLSIPLNSYGQYLGLTNATTDGSGANKLVAVELDTVKQDFDPDDNHIGLDINSVRSNVSVSLSKLGIQISPNGTVFHVLWVEYDGERKVIDVYMAEQDDKDAPIAAKPTKPVLSSSLDLKSLVNQESYFGFSASTGVTYELNCVLRWNISMMVFPENKSKDWNGITIGLGVGVPLVLIGIGGLVYFLLKKKRAGSYSDPQIMGTLKSLPGTPREFIYQELKKATNNFDEKNKLGQGGYGVVYKGTLPKENLEVAVKMFSRDKMKSTDDFLSELTIINRLRHRHLVRLLGWCHKNGVLLLVYEYMPNGSLDSHIFCEEGSTIETTLSWHLRYKIISGVAYALNYLHNEYDQKVIHRDLKASNIMLDSDFNARLGDFGLARAIENEKTSYAELEGVHGTMGYIAPECFHTGKATRESDIYGFGAVLLEVVCGQRPWTKIEDYQLLVDWVWYLHRERRILEAVDPRLESNYVIEEAERILKLGLACSHPIASERPKMQAIVQIISGSVPVPHVPPFKPSFVWPAMDFSNFDSEITATSTTEYSPFNTQSSSVHVGLSDV* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0396 701 Pfam Protein kinase domain 373 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0396 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 70 298 IPR013320 -
Lan6g0396 701 SMART serkin_6 372 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0396 701 CDD STKc_IRAK 378 646 - -
Lan6g0396 701 Pfam Legume lectin domain 73 302 IPR001220 GO:0030246
Lan6g0396 701 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 28 691 - -
Lan6g0396 701 ProSitePatterns Protein kinases ATP-binding region signature. 378 401 IPR017441 GO:0005524
Lan6g0396 701 SUPERFAMILY Protein kinase-like (PK-like) 354 676 IPR011009 -
Lan6g0396 701 Gene3D Phosphorylase Kinase; domain 1 357 448 - -
Lan6g0396 701 Gene3D - 58 309 - -
Lan6g0396 701 Gene3D Transferase(Phosphotransferase) domain 1 449 650 - -
Lan6g0396 701 CDD lectin_legume_LecRK_Arcelin_ConA 74 296 IPR001220 GO:0030246
Lan6g0396 701 PANTHER - 28 691 - -
Lan6g0396 701 ProSitePatterns Legume lectins beta-chain signature. 174 180 IPR019825 -
Lan6g0396 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Lan6g0396 701 ProSiteProfiles Protein kinase domain profile. 372 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0396 Lan-Chr6 3174463 3179000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0396 79 661 Receptor kinase-like Gene Family AT3G53810 38.523 4.09e-128 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan6g0396 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0396 - - gmx:100784558 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0852 18 13857543 13861873 Lan6g0396 6 3174463 3179000 LSH