Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0385 ATGTATATTTGTTCTCTTAACTTACCTTCATCTTGGTTTATATACCTTTACTTGCTTCTAATTCTCTTTACCTTCAAATCAACATGGTTTGGCCGAAAAACTATTGCGTCTGCGTCAGGAAACGAAACCGACCAGTTAGCACTACTCAAGTTCAAGGAATTAATATCCAATGACCCTTACAGAATCTTGGACTCTTGGAATAGTTCTACCAACTTCTGCAATTGGGATGGAGTCACATGCAATCCCATGCATGAAAGAGTCATACAGTTGAACCTACAAGGATATCAATTGCATGGAACCATTTCTCCTCTAGTTGGCAATCTCTCTTTCCTCAGAGTCCTCGACCTCGGAAACAACAACTTCTATGGAACAATCCCACAAGAATTTGGTCGTTTATTGCAACTGCAGGGAGCTGATGTTAGCAATAATTCCTTGCATGGGGAATTTCCTATTAACATGACAAGTTGTTTTCAACTACAAGAGTTAAACTTGTATGGAAACAATTTGATTGGCAAAATACCAATTGAAATTGGATCTCTTAGGAAGCTTCAAGTGTTATCTGTTGGGAGAAACAAATTAACAGGACAAATCCCTGCATCAATAGGGAACCTTTCATCACTTACCCATCTTTTTATGGGTGAAAATAACTTGGAGGGAGAAATTCCTCAAGAAATAGGCCTTCTGAGAAATTTGACATATATACAAGTAGGTGAAAATAAACTATCTGGTATGCTTCCATCTACTCTTTTCAACATATCATCTCTCATTACAATTGCAGCTACACTCAATCAATTTAATGGTTCTCTTCCATCCAACATGTTCCACAACCTCCCCAATCTACAACAATTTGGAATTGGAGGGAATCAGATATCAGGTCCAATCCCCATTTCCATCACAAATGCATCTGTTCTTCAACTTCTTGATATCGGCTTCAACTATTTCGTAGGACAAGTTCCAAGTCTAGGGAAGTTACTAGATATAAAGTACATAGATTTGGAAAACAACAGTTTAGGTAGCAATTTGACTAATGACTTCGATTTTTTGGAATCATTGACAAATTGTAGCAAGCTGTATTTGTTCTCTATATCCTACAATAACTTTGGAGGGTACTTACCGAATTTCATAGGAAACTTATCCACCCAACTAAGTCAACTATATCTTGGGTTTAACCAAATATCAGGACAAATTCCTGCAGAATTAGCAAACCTGAACAACTTAACTATTTTGAGCATGGGCTACAATCATTTTGATGGGATTATTCCAACTGCTTTTGAGAAATTTCGGGAGATGCAAATCTTAGGATTGGATGGAAACAAGCTATCAGGTGTTATACCAACCTCTATAGGTAACCTCAGTAAGTTGTTTTCCTTGAGTTTAACACAAAATATGTTAGAAGGAAATATCCCTCCAAGCATAGGAAACTGCCAGAAGCTACAATCCATTTACCTTGCACAAAACAACCTTACAGGACCCATACCATCAGAGGTTTTTAGTCTCTCATCTCTAACAGAATTCCTAGACTTGTCCCAAAACTTATTTAGTGGAAGTTTACCTGATGAAGTAGGAAGGCTAAAAAATATCGAAAAATTGGATGTCTCTGACAATCATTTGTCTGGTAATATTCCGGGAACTATTGGAGAATGTATGAGCTTAGAGTACCTTTATATGCAAGGAAATTCCTTCAATGGAGTCATACCATCTTCTTTGTCTTCACTGAAAGGTCTTCAATATTTAGACCTGTCACGAAACCACTTATCCGGATCAATTCCTGAAGGTATGCAGGGCATTTCTGTTTTAGAATACTTCAATGTTTCTTTTAACATGCTTGATGGCGCGGTACCAACAGAAGGTGTCTTTAAAAATTCAAGCAGGTTTTCCATAACAGGAAATAGTAAGCTTTGTGGAGGTATTTCAAATCTACATCTACCACCATGCCCTGTCAATGGTAGAAAACTTTCAAAGCACCACAATTTTAGGAAGCTAATAGCAGTGGTAGTTTCTGTGGTTGCTTTTCTTCTCATATTGTCATTTAGCCTAACTATATACTGGATGAGGAAAAGTAAAAAGAAACCATCTTTTGATTCACCAACAATTGATCACTTGGTTAAGGTTTCATACCAAAATCTACACAATGGAACTGATGGGTTTTCAGCTAGAAATTTAATAGGATCTGGAAGCTTTGGCTTTGTCTACAAAGGGACTCTTGAGTCAGAAGATAAAATTGTTGCCATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGCAGAGTGTGATGCGCTGAGAAATATGAGGCATCGAAACCTGGTTAAGATTTTAACATGTTGTTCAAGTACAGATTACAAAGGTCAAGCATTTAAAGCTTTAGTTTATGAGTACATGGCAAATGGAAGCTTAGAACCATGGTTGCATCCGGCAAAAGAAAATGCACAGCAATCCAGACCATTGAATGTTGCTCAAAGATTGAGTATTATTATTGATGTTGCTTCTGCAATCCATTATCTTCACCATGAATGTGAGCAACCGGTCATTCACTGTGATTTAAAGCCGAGCAATATTCTTCTTGATGATTGCTTGGTAGCTCATGTGAGTGATTTTGGCATATCAAGACTGCTCTCAAGTATTGGAGTCCCTCCAAAACAAACTAGCACAACTGGAATAAAGGGCACTATTGGTTATGCTCCTCCAGAATATGGAATGAGTTATGAGGTATCAATCGAAGGCGACATGTATAGTTTCGGAATTCTTGTTTTAGAAATGCTAACCGGAAGGAGACCCACAGATGAAATGTTTAAAGATGGTCAAACTCTTCACAACCATGTCAAAATTTCAATTCCAAATCACCTTTCACAGATTGTGGACCCAAGTACTCTGCCTGAGGAATTAGAACAGGATGCTGACAATAAAAGCATGATACTTACTGATCCTAATGTAAATGAATGCTTACTTTCACTTTTTAGTATTGCACTAGCTTGTTCAGTGGAATCACCAAAACAAAGAATGAGTATGATTGATGTGATCAAGGAGCTTAATGTGATCAAAAGTTCCTTCTTTCTGGTGTAA 3075 0.3746 MYICSLNLPSSWFIYLYLLLILFTFKSTWFGRKTIASASGNETDQLALLKFKELISNDPYRILDSWNSSTNFCNWDGVTCNPMHERVIQLNLQGYQLHGTISPLVGNLSFLRVLDLGNNNFYGTIPQEFGRLLQLQGADVSNNSLHGEFPINMTSCFQLQELNLYGNNLIGKIPIEIGSLRKLQVLSVGRNKLTGQIPASIGNLSSLTHLFMGENNLEGEIPQEIGLLRNLTYIQVGENKLSGMLPSTLFNISSLITIAATLNQFNGSLPSNMFHNLPNLQQFGIGGNQISGPIPISITNASVLQLLDIGFNYFVGQVPSLGKLLDIKYIDLENNSLGSNLTNDFDFLESLTNCSKLYLFSISYNNFGGYLPNFIGNLSTQLSQLYLGFNQISGQIPAELANLNNLTILSMGYNHFDGIIPTAFEKFREMQILGLDGNKLSGVIPTSIGNLSKLFSLSLTQNMLEGNIPPSIGNCQKLQSIYLAQNNLTGPIPSEVFSLSSLTEFLDLSQNLFSGSLPDEVGRLKNIEKLDVSDNHLSGNIPGTIGECMSLEYLYMQGNSFNGVIPSSLSSLKGLQYLDLSRNHLSGSIPEGMQGISVLEYFNVSFNMLDGAVPTEGVFKNSSRFSITGNSKLCGGISNLHLPPCPVNGRKLSKHHNFRKLIAVVVSVVAFLLILSFSLTIYWMRKSKKKPSFDSPTIDHLVKVSYQNLHNGTDGFSARNLIGSGSFGFVYKGTLESEDKIVAIKVLNLQKKGAHKSFIAECDALRNMRHRNLVKILTCCSSTDYKGQAFKALVYEYMANGSLEPWLHPAKENAQQSRPLNVAQRLSIIIDVASAIHYLHHECEQPVIHCDLKPSNILLDDCLVAHVSDFGISRLLSSIGVPPKQTSTTGIKGTIGYAPPEYGMSYEVSIEGDMYSFGILVLEMLTGRRPTDEMFKDGQTLHNHVKISIPNHLSQIVDPSTLPEELEQDADNKSMILTDPNVNECLLSLFSIALACSVESPKQRMSMIDVIKELNVIKSSFFLV* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0385 1024 PANTHER LRR RECEPTOR-LIKE KINASE 29 1022 - -
Lan6g0385 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Lan6g0385 1024 ProSiteProfiles Protein kinase domain profile. 716 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0385 1024 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Lan6g0385 1024 SMART serkin_6 716 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0385 1024 SUPERFAMILY L domain-like 41 337 - -
Lan6g0385 1024 Gene3D Transferase(Phosphotransferase) domain 1 798 1021 - -
Lan6g0385 1024 PANTHER OS04G0122200 PROTEIN 29 1022 - -
Lan6g0385 1024 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Lan6g0385 1024 CDD STKc_IRAK 722 1015 - -
Lan6g0385 1024 Pfam Leucine rich repeat 405 464 IPR001611 GO:0005515
Lan6g0385 1024 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Lan6g0385 1024 Gene3D Phosphorylase Kinase; domain 1 680 797 - -
Lan6g0385 1024 Gene3D Ribonuclease Inhibitor 321 652 IPR032675 -
Lan6g0385 1024 SMART LRR_typ_2 499 524 IPR003591 -
Lan6g0385 1024 SMART LRR_typ_2 572 595 IPR003591 -
Lan6g0385 1024 SMART LRR_typ_2 108 132 IPR003591 -
Lan6g0385 1024 SMART LRR_typ_2 228 251 IPR003591 -
Lan6g0385 1024 SMART LRR_typ_2 180 204 IPR003591 -
Lan6g0385 1024 SMART LRR_typ_2 403 426 IPR003591 -
Lan6g0385 1024 SMART LRR_typ_2 451 475 IPR003591 -
Lan6g0385 1024 SUPERFAMILY L domain-like 381 635 - -
Lan6g0385 1024 Pfam Protein kinase domain 719 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0385 1024 SUPERFAMILY Protein kinase-like (PK-like) 690 1014 IPR011009 -
Lan6g0385 1024 Gene3D Ribonuclease Inhibitor 40 320 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0385 Lan-Chr6 3121631 3125629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0385 41 1022 Receptor kinase-like Gene Family AT3G47570 45.519 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lan6g0385 Pkinase 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0385 - - gmx:100792724 1350.11