Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0377 ATGGCCATTGCAAAAATTGAAAAATTACAGGCAAAGAAAGGTTTTCATGGTATTGTGCTTGTTTCTTATGTCTTCTTTACAGTTGCAGGATCAGATAGCCGAAAATCTTCTGCAAGAAACCCATCTCTCGTTTCTCTCAATTTCAATCTTCGGCAAGATACCCATCTCTCTTTTCTCTGGCTTGGCAACTTCATGAAGAAGGGAAGCTATTGGAGGAGACCACTGATGAAGGTAGCTTTCTTCTGCACACAAGCAGCAACAAGCAGAAGACCGCTAATGTTATCGAAGAAAACCCGGCTCAATGAGAAGCAACTTACAGCTCCAGGCTTCTTCCTTGATTCAGGAGAATCCTCAAGAAATAAGTCATCCTATTATGGGTCTTTAACGTATCAATTTAGCTCTACCCATGTCCCAGAATATTGGAGACAGGTAGCAGTGAAGACCCTTTCAGCTGGGTCAAGGCTGGGAGTTCGTGATTTTTTTACTGAAATTAATACTGTATCACATGTTAAGCATCCAAACCTTGTTGAATTGATCGGTTGCTGCGTTGAAGGACCAAGTCGTGTATTAGTCTACGAGTATGAAGAAAATAACAGCCTTGATCGTGCATTACTTGGCACATGGATTTCTATCATCAGACTTGACTGGAGAAAAAGAGCTAGTATTTGCATGGGTACCACCAAGGGTCTTGCATTTCTTCAAGAAGAACTTGTGCCGCATATTGTGCACAGAGACATCAAAGCTAGCAATATACTGCTTCACAGAGACTTCAATCCAAAAATAGGAGATTTTGGGTTGGCAAAATTATTTCCAGATAACATCACTCACATTAGCGCAAGAATTGCTGGAACAACTGGTTACTTGCGCCTGAGTATGCGATGGGTGGACAGTTAA 894 0.415 MAIAKIEKLQAKKGFHGIVLVSYVFFTVAGSDSRKSSARNPSLVSLNFNLRQDTHLSFLWLGNFMKKGSYWRRPLMKVAFFCTQAATSRRPLMLSKKTRLNEKQLTAPGFFLDSGESSRNKSSYYGSLTYQFSSTHVPEYWRQVAVKTLSAGSRLGVRDFFTEINTVSHVKHPNLVELIGCCVEGPSRVLVYEYEENNSLDRALLGTWISIIRLDWRKRASICMGTTKGLAFLQEELVPHIVHRDIKASNILLHRDFNPKIGDFGLAKLFPDNITHISARIAGTTGYLRLSMRWVDS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0377 297 Gene3D Transferase(Phosphotransferase) domain 1 196 292 - -
Lan6g0377 297 Gene3D Phosphorylase Kinase; domain 1 109 194 - -
Lan6g0377 297 ProSiteProfiles Protein kinase domain profile. 100 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0377 297 PANTHER - 141 288 - -
Lan6g0377 297 SMART serkin_6 130 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0377 297 SUPERFAMILY Protein kinase-like (PK-like) 142 288 IPR011009 -
Lan6g0377 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Lan6g0377 297 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 141 288 - -
Lan6g0377 297 Pfam Protein tyrosine and serine/threonine kinase 142 270 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0377 Lan-Chr6 2972881 2977946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0377 144 288 Receptor kinase-like Gene Family AT1G53420 58.621 2.96e-50 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan6g0377 PK_Tyr_Ser-Thr 4.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0377 - - lang:109350390 600.127